| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934346
Identifier: 187934346
GI number: 187934346
Start: 2027919
End: 2028557
Strand: Reverse
Name: 187934346
Synonym: CLL_A1954
Alternate gene names: NA
Gene position: 2028557-2027919 (Counterclockwise)
Preceding gene: 187932951
Following gene: 187934695
Centisome position: 53.38
GC content: 26.92
Gene sequence:
>639_bases ATGAGTTTATTTTTAGGTAAGATACATTTTTGGCTATTTAATAAAATTTTATGGTTTGAAGGGTTAGAAAATGAAATAAT TGATGTTGCAAAAAGTGAAGGATTAGATATCTTAAATTTGCAAAAAGAAATTGAGGATAAGTATGGAACGAAGCTACCTA ATAAGCCTCTTGATGAGATTATAGATACAAGCAATATTCATGGATGGTTACAAGAAAGAATATACTCATCAGAAGGAAGA ATAGCAGCTTGGACTACTGTAATAATAGATAATAAGAGAGAAGCTAAGACAAAGTTAGAAGAAATATATATTAATCAAGG AATTATAGCAGCAAAAGAAGTAAAAGAAGAGGGCATTAGATTAGACAGTGCAGAAAATATATTTAATAAAGTTAATGATT ATATTTTAGATGGAATGCCATGTGATAGAGTAAATGAAATCATAAATAGCAATGAAAATTGCATAGAATGGACTAGAAGA ATTTGTGTACATAAAGAAATTTGGGATAAAGAAAGTGGAGACGTGGAGTACTTTTATTTTTTAAGGAGTTTATGGATTAA AGCTTTTGTAAATGAAATAAATAATGAATTTGATTATTTAGAAGAAAATAATGGTGTAAAATCTATAAGAAGAAAATAA
Upstream 100 bases:
>100_bases AAGATATTTTATAATATTTTGTACATAATAAAAATATTATAATTATTTTAAATTATGTAAATTTAAGGCTTTTAGATGAA TTAAATTAGGAGGAAAAGAT
Downstream 100 bases:
>100_bases GGATTTCTATAAAAATATACACTTGTAATTTAAGACAGATTTTATTTATATAAGATAATAAATATGCTAATTAACCAAGA AAACATTAGATTGGTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSLFLGKIHFWLFNKILWFEGLENEIIDVAKSEGLDILNLQKEIEDKYGTKLPNKPLDEIIDTSNIHGWLQERIYSSEGR IAAWTTVIIDNKREAKTKLEEIYINQGIIAAKEVKEEGIRLDSAENIFNKVNDYILDGMPCDRVNEIINSNENCIEWTRR ICVHKEIWDKESGDVEYFYFLRSLWIKAFVNEINNEFDYLEENNGVKSIRRK
Sequences:
>Translated_212_residues MSLFLGKIHFWLFNKILWFEGLENEIIDVAKSEGLDILNLQKEIEDKYGTKLPNKPLDEIIDTSNIHGWLQERIYSSEGR IAAWTTVIIDNKREAKTKLEEIYINQGIIAAKEVKEEGIRLDSAENIFNKVNDYILDGMPCDRVNEIINSNENCIEWTRR ICVHKEIWDKESGDVEYFYFLRSLWIKAFVNEINNEFDYLEENNGVKSIRRK >Mature_211_residues SLFLGKIHFWLFNKILWFEGLENEIIDVAKSEGLDILNLQKEIEDKYGTKLPNKPLDEIIDTSNIHGWLQERIYSSEGRI AAWTTVIIDNKREAKTKLEEIYINQGIIAAKEVKEEGIRLDSAENIFNKVNDYILDGMPCDRVNEIINSNENCIEWTRRI CVHKEIWDKESGDVEYFYFLRSLWIKAFVNEINNEFDYLEENNGVKSIRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24996; Mature: 24864
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFLGKIHFWLFNKILWFEGLENEIIDVAKSEGLDILNLQKEIEDKYGTKLPNKPLDEI CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHH IDTSNIHGWLQERIYSSEGRIAAWTTVIIDNKREAKTKLEEIYINQGIIAAKEVKEEGIR HCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC LDSAENIFNKVNDYILDGMPCDRVNEIINSNENCIEWTRRICVHKEIWDKESGDVEYFYF CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH LRSLWIKAFVNEINNEFDYLEENNGVKSIRRK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC >Mature Secondary Structure SLFLGKIHFWLFNKILWFEGLENEIIDVAKSEGLDILNLQKEIEDKYGTKLPNKPLDEI CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHH IDTSNIHGWLQERIYSSEGRIAAWTTVIIDNKREAKTKLEEIYINQGIIAAKEVKEEGIR HCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC LDSAENIFNKVNDYILDGMPCDRVNEIINSNENCIEWTRRICVHKEIWDKESGDVEYFYF CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH LRSLWIKAFVNEINNEFDYLEENNGVKSIRRK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA