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The map label for this gene is sdaAB [H]

Identifier: 187934314

GI number: 187934314

Start: 3216364

End: 3217044

Strand: Reverse

Name: sdaAB [H]

Synonym: CLL_A3109

Alternate gene names: 187934314

Gene position: 3217044-3216364 (Counterclockwise)

Preceding gene: 187933922

Following gene: 187933422

Centisome position: 84.65

GC content: 30.98

Gene sequence:

>681_bases
ATGAAAAGTTTAGGTGTTTTTGATATTTTAGGACCAGTAATGATAGGTCCATCTAGTTCTCATACAGCTGGAGCTGCAAG
ACTTGGAAAGATTGCAAGAATAATAGCTGGTAGTGAAATAAAGGAAGTAACATTTTTATTACATGGCTCTTTTGGTAAAA
CATATAAAGGTCATGGAACAGATAGGGCCTTAGTTGCTGGAATTTTAGGAATGGAACCAAGTGATGAAAGACTTAGAGAT
TCTATGGAAATAGCAAGAGAAAGAGGAATAAAATTTTTATTTAAAGAAGCTGATTTAGGTGATGTACATCCTAATACAGT
TAAATTTTTAATGGATACAGTAAATGATACATATTGTGAGGTTGTTGGATCATCTATTGGTGGTGGAAATATTCAAATTT
CTGAAGTTAATGGTAATCCAGTCGAATTTACTGGAAATTATGAAACTTTAATAGTTTCTCAAAGGGATTTACCAGGAGTT
ATACATAGTGTAACTAGTATTTTATCAAAGGAAAATATAAATGTAGCTTTCATGAAAGTTTTTAGAAATCACAAAGGTAA
AGATGCTACAATGATTTTTGAAATGGATAATAAGATTAGTGAAAAAGCTATAAGAGAGATAGAAAAATTAGAGTTAGTGC
ATAGGATTATTTCAATAAGTCCAGCAAAGGAAGGTGAGTAA

Upstream 100 bases:

>100_bases
CTTATACATATATCAATATTATGTCAAACAACAGTGTAATAAATGTTTAATGAGAGGAGGTATTTAGCTGAAATTTATTA
TATTTAGCTAAATAATATTT

Downstream 100 bases:

>100_bases
AATGCTTGCAAGAACAGGGGAAGAGTTATTAAAAATTTGTAAGGAAAATAATATATCTTTAAGTGAGTATGCTATAAGAT
GTGAAGTTGAAGAAAAGGGA

Product: L-serine dehydratase, iron-sulfur-dependent, beta subunit

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKSLGVFDILGPVMIGPSSSHTAGAARLGKIARIIAGSEIKEVTFLLHGSFGKTYKGHGTDRALVAGILGMEPSDERLRD
SMEIARERGIKFLFKEADLGDVHPNTVKFLMDTVNDTYCEVVGSSIGGGNIQISEVNGNPVEFTGNYETLIVSQRDLPGV
IHSVTSILSKENINVAFMKVFRNHKGKDATMIFEMDNKISEKAIREIEKLELVHRIISISPAKEGE

Sequences:

>Translated_226_residues
MKSLGVFDILGPVMIGPSSSHTAGAARLGKIARIIAGSEIKEVTFLLHGSFGKTYKGHGTDRALVAGILGMEPSDERLRD
SMEIARERGIKFLFKEADLGDVHPNTVKFLMDTVNDTYCEVVGSSIGGGNIQISEVNGNPVEFTGNYETLIVSQRDLPGV
IHSVTSILSKENINVAFMKVFRNHKGKDATMIFEMDNKISEKAIREIEKLELVHRIISISPAKEGE
>Mature_226_residues
MKSLGVFDILGPVMIGPSSSHTAGAARLGKIARIIAGSEIKEVTFLLHGSFGKTYKGHGTDRALVAGILGMEPSDERLRD
SMEIARERGIKFLFKEADLGDVHPNTVKFLMDTVNDTYCEVVGSSIGGGNIQISEVNGNPVEFTGNYETLIVSQRDLPGV
IHSVTSILSKENINVAFMKVFRNHKGKDATMIFEMDNKISEKAIREIEKLELVHRIISISPAKEGE

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 24672; Mature: 24672

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLGVFDILGPVMIGPSSSHTAGAARLGKIARIIAGSEIKEVTFLLHGSFGKTYKGHGT
CCCCCHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCC
DRALVAGILGMEPSDERLRDSMEIARERGIKFLFKEADLGDVHPNTVKFLMDTVNDTYCE
CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHH
VVGSSIGGGNIQISEVNGNPVEFTGNYETLIVSQRDLPGVIHSVTSILSKENINVAFMKV
HHCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHH
FRNHKGKDATMIFEMDNKISEKAIREIEKLELVHRIISISPAKEGE
HHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKSLGVFDILGPVMIGPSSSHTAGAARLGKIARIIAGSEIKEVTFLLHGSFGKTYKGHGT
CCCCCHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCC
DRALVAGILGMEPSDERLRDSMEIARERGIKFLFKEADLGDVHPNTVKFLMDTVNDTYCE
CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHH
VVGSSIGGGNIQISEVNGNPVEFTGNYETLIVSQRDLPGVIHSVTSILSKENINVAFMKV
HHCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHH
FRNHKGKDATMIFEMDNKISEKAIREIEKLELVHRIISISPAKEGE
HHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9244285; 2065681 [H]