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The map label for this gene is hag [H]

Identifier: 187934307

GI number: 187934307

Start: 3617254

End: 3618633

Strand: Reverse

Name: hag [H]

Synonym: CLL_A3427

Alternate gene names: 187934307

Gene position: 3618633-3617254 (Counterclockwise)

Preceding gene: 187933537

Following gene: 187935668

Centisome position: 95.22

GC content: 32.97

Gene sequence:

>1380_bases
ATGATAATCAATCACAATATGAACGCAATGAACGCACACAGAAACATGGGAATGAACACTGTTAACAGTGGTAAATCAAT
GGAAAAATTAAGCTCAGGTTTAAGAATAAATAGAGCTGGAGATGACGCAGCAGGTCTTGCAATCTCTGAAAAAATGAGAG
GACAAATTAGAGGTCTTGATCAAGCTCAAAGAAATTCTCAAGATGGTATTTCTTTAATTCAAACAGCAGAAGGTGCTTTA
AATGAAACTCACTCAATTCTTCAAAGAATGAGAGAATTATCAGTACAAGGTGCAAATGATACAAATAATGAAAATGATAG
AGGTCAAATCCAAAAAGAAATGGATCAATTAAGAAATGAAATTGATAGAATTTCTGATACAACAGAATTTAATACTAAGA
AACTTTTAAATGGAGATTCTGATGTAAAAAGCAAATTAGGAACAGCTCTTGATGGTAATATCAAAGTTACAGGAGCATCT
GATAAAACAGTAGCTGGTACAGAATTTGCTATAACAAAAGTTGAAGAAGCCACTGCAACAAAAGCGACTACAGCTATAGC
AACTAATGCAGATACTACTGATAAGGTAACTTTAAAAGTAGGAGATAAAAAACTTGAATTAGCATCAGGAACTAAGAAAG
AAGATATAGTTGATAAAGTTAATGAATTCTTAAAAAAAGAAGGAATAGATGCAACTGCATCAGCAGAATCAAATAAATTA
GTTATAACTTCAAACAAAGTAGGTTCAGATGTAAAATTAGCAAAAATAACTGATGATTCAGCAGCAAAAGGAACAGAGGC
TGCTGCAACAGTAGCAGATGGAACAAATGCTAAAATTACAGTTGATGGAGTAGCAGATAAAATAGAAGGTAAAGGAAACA
CTATAGAAATTAATGATGAAATTGCAGGCGCAAAAGGATTAACAATAGATGTCAAATCAGCTGTTACATCTGCTGATACA
ACTACTGGTAAAGTAACAATAGACTCTGTTGGAATGAATCTACAAATAGGAGCAAATGAAGGACAAAATATTGCGTTATC
TATAGGAAACATGAGTTCAAAAGAATTAGGAGTAGATTCTATAGATGTTAGTGATGCTAAGAAATCTGATGTAGCAGTAA
CAACTATTCAAAGTGCTATAGATAAAGTTTCTGCTGAAAGAAGTAAACTTGGTGCATACCAAAATAGACTAGAACATACA
ATAAATAACTTAGGAACTTCTTCAGAAAATTTAACAGCTGCTGAAAGTAGAGTTAGAGACGTTGACATGGCTAAAGAAAT
GATGGCATTCTCTAAGAATAACATTCTTAGCCAAGCTGCACAAGCTATGCTTGCTCAAGCTAACCAACAACCACAAGGAG
TTCTTCAATTATTAAGATAA

Upstream 100 bases:

>100_bases
TCAACAAAGTTAGTTATCCCGTAAGGGTTTCTATAAATATAAAAAAATAAATTATGGTGGAAAAGGATGTCCACTTTAAA
ATTCAAGGAGGTATTTTATT

Downstream 100 bases:

>100_bases
TTGACATTCTAAATCTTTGATTTAGTTAGTGGAACTTATAAAAAAGTCAGGGCGAAAGCTCTGGCTTTTTTGGTTTAAAC
AGCAAAAAGGTTTAGGGTTG

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MIINHNMNAMNAHRNMGMNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAQRNSQDGISLIQTAEGAL
NETHSILQRMRELSVQGANDTNNENDRGQIQKEMDQLRNEIDRISDTTEFNTKKLLNGDSDVKSKLGTALDGNIKVTGAS
DKTVAGTEFAITKVEEATATKATTAIATNADTTDKVTLKVGDKKLELASGTKKEDIVDKVNEFLKKEGIDATASAESNKL
VITSNKVGSDVKLAKITDDSAAKGTEAAATVADGTNAKITVDGVADKIEGKGNTIEINDEIAGAKGLTIDVKSAVTSADT
TTGKVTIDSVGMNLQIGANEGQNIALSIGNMSSKELGVDSIDVSDAKKSDVAVTTIQSAIDKVSAERSKLGAYQNRLEHT
INNLGTSSENLTAAESRVRDVDMAKEMMAFSKNNILSQAAQAMLAQANQQPQGVLQLLR

Sequences:

>Translated_459_residues
MIINHNMNAMNAHRNMGMNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAQRNSQDGISLIQTAEGAL
NETHSILQRMRELSVQGANDTNNENDRGQIQKEMDQLRNEIDRISDTTEFNTKKLLNGDSDVKSKLGTALDGNIKVTGAS
DKTVAGTEFAITKVEEATATKATTAIATNADTTDKVTLKVGDKKLELASGTKKEDIVDKVNEFLKKEGIDATASAESNKL
VITSNKVGSDVKLAKITDDSAAKGTEAAATVADGTNAKITVDGVADKIEGKGNTIEINDEIAGAKGLTIDVKSAVTSADT
TTGKVTIDSVGMNLQIGANEGQNIALSIGNMSSKELGVDSIDVSDAKKSDVAVTTIQSAIDKVSAERSKLGAYQNRLEHT
INNLGTSSENLTAAESRVRDVDMAKEMMAFSKNNILSQAAQAMLAQANQQPQGVLQLLR
>Mature_459_residues
MIINHNMNAMNAHRNMGMNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAQRNSQDGISLIQTAEGAL
NETHSILQRMRELSVQGANDTNNENDRGQIQKEMDQLRNEIDRISDTTEFNTKKLLNGDSDVKSKLGTALDGNIKVTGAS
DKTVAGTEFAITKVEEATATKATTAIATNADTTDKVTLKVGDKKLELASGTKKEDIVDKVNEFLKKEGIDATASAESNKL
VITSNKVGSDVKLAKITDDSAAKGTEAAATVADGTNAKITVDGVADKIEGKGNTIEINDEIAGAKGLTIDVKSAVTSADT
TTGKVTIDSVGMNLQIGANEGQNIALSIGNMSSKELGVDSIDVSDAKKSDVAVTTIQSAIDKVSAERSKLGAYQNRLEHT
INNLGTSSENLTAAESRVRDVDMAKEMMAFSKNNILSQAAQAMLAQANQQPQGVLQLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=146, Percent_Identity=45.8904109589041, Blast_Score=121, Evalue=9e-29,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 48570; Mature: 48570

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINHNMNAMNAHRNMGMNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLD
CEECCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCEEEECCCCHHCCCHHHHHHHHHCCCH
QAQRNSQDGISLIQTAEGALNETHSILQRMRELSVQGANDTNNENDRGQIQKEMDQLRNE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
IDRISDTTEFNTKKLLNGDSDVKSKLGTALDGNIKVTGASDKTVAGTEFAITKVEEATAT
HHHHCCCCCCCHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCEECCCEEEEEEHHHHHHH
KATTAIATNADTTDKVTLKVGDKKLELASGTKKEDIVDKVNEFLKKEGIDATASAESNKL
HHHEEEEECCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEE
VITSNKVGSDVKLAKITDDSAAKGTEAAATVADGTNAKITVDGVADKIEGKGNTIEINDE
EEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCCHHHCCCCCCEEEECCC
IAGAKGLTIDVKSAVTSADTTTGKVTIDSVGMNLQIGANEGQNIALSIGNMSSKELGVDS
CCCCCCCEEEHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCC
IDVSDAKKSDVAVTTIQSAIDKVSAERSKLGAYQNRLEHTINNLGTSSENLTAAESRVRD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VDMAKEMMAFSKNNILSQAAQAMLAQANQQPQGVLQLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure
MIINHNMNAMNAHRNMGMNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLD
CEECCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCEEEECCCCHHCCCHHHHHHHHHCCCH
QAQRNSQDGISLIQTAEGALNETHSILQRMRELSVQGANDTNNENDRGQIQKEMDQLRNE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
IDRISDTTEFNTKKLLNGDSDVKSKLGTALDGNIKVTGASDKTVAGTEFAITKVEEATAT
HHHHCCCCCCCHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCEECCCEEEEEEHHHHHHH
KATTAIATNADTTDKVTLKVGDKKLELASGTKKEDIVDKVNEFLKKEGIDATASAESNKL
HHHEEEEECCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEE
VITSNKVGSDVKLAKITDDSAAKGTEAAATVADGTNAKITVDGVADKIEGKGNTIEINDE
EEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEECCCHHHCCCCCCEEEECCC
IAGAKGLTIDVKSAVTSADTTTGKVTIDSVGMNLQIGANEGQNIALSIGNMSSKELGVDS
CCCCCCCEEEHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCC
IDVSDAKKSDVAVTTIQSAIDKVSAERSKLGAYQNRLEHTINNLGTSSENLTAAESRVRD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VDMAKEMMAFSKNNILSQAAQAMLAQANQQPQGVLQLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1479346; 11058132 [H]