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The map label for this gene is bin3 [H]

Identifier: 187934269

GI number: 187934269

Start: 2010526

End: 2011173

Strand: Reverse

Name: bin3 [H]

Synonym: CLL_A1923

Alternate gene names: 187934269

Gene position: 2011173-2010526 (Counterclockwise)

Preceding gene: 187933389

Following gene: 187933482

Centisome position: 52.92

GC content: 28.09

Gene sequence:

>648_bases
ATGAGAACGTATGGCTATATTAGAGTTAGTAGTAAAAAGCAAAATGAAGAAAGGCAAAGAGTAGCTTTAAGAGAATACTG
TGAAGAAAATAAAATAAATATGGACTTTGAAAGAGATGTTATTACAGATGAACAAAGTGGTAAGAATTTTAAGAGAGAAG
GATATATACTTCTAAAAGAACATCTTTTAAGAGCTGGTGATACTTTAATCATAAAAGAACTGGACCGTTTAGGTAGAAAT
ATGGATATGATTAAAGATGAATGGATAGCACTTGAAAAAATGGGTGTTAATTTAATAATTATTGATAATCCAATGTTAAG
TACTAATAATAAAGGTGATCTTGATAGAAAGGTAATAAGTAATATAGTATTTGAATTAATGTCTTATATGGCTCAAAAAG
AAAGAGAAAAGATACTTAAAAGGCAAGCAGAAGGATTAGCAGCTATGCCAGTAGATAATAATGGAAAGAAAATATCTATG
AAAACTAAAAGAGCTATTGGTAGACCTTCACTTGAATATCCTTCAAATTGGAAAGAAACTTATGATAATTGGAAATCTGG
TGAAATAACAGCAGTAAAGGCTATGGAATTTACAGAATTAAAGAAAACTAGCTTTTATAAATTAGTTAAGCAATATGAAA
GTAAATAA

Upstream 100 bases:

>100_bases
AGTATAAGTGATAGGGGCATATTCTAAATTGCAGAATCTCAAAAACCTGTCACTAAGCTCCATAAAATTTTATTATATTT
TTTAAATTGAGGTGTTGGGT

Downstream 100 bases:

>100_bases
TTATTAGCACTTAGAGTTTATCTAGGTGCTTTTTAAATGTAATAAAATAGTTTAATTAAGGAGCAGTAAATCATGAAAAT
AGAGAATATACAAATACGAA

Product: resolvase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRTYGYIRVSSKKQNEERQRVALREYCEENKINMDFERDVITDEQSGKNFKREGYILLKEHLLRAGDTLIIKELDRLGRN
MDMIKDEWIALEKMGVNLIIIDNPMLSTNNKGDLDRKVISNIVFELMSYMAQKEREKILKRQAEGLAAMPVDNNGKKISM
KTKRAIGRPSLEYPSNWKETYDNWKSGEITAVKAMEFTELKKTSFYKLVKQYESK

Sequences:

>Translated_215_residues
MRTYGYIRVSSKKQNEERQRVALREYCEENKINMDFERDVITDEQSGKNFKREGYILLKEHLLRAGDTLIIKELDRLGRN
MDMIKDEWIALEKMGVNLIIIDNPMLSTNNKGDLDRKVISNIVFELMSYMAQKEREKILKRQAEGLAAMPVDNNGKKISM
KTKRAIGRPSLEYPSNWKETYDNWKSGEITAVKAMEFTELKKTSFYKLVKQYESK
>Mature_215_residues
MRTYGYIRVSSKKQNEERQRVALREYCEENKINMDFERDVITDEQSGKNFKREGYILLKEHLLRAGDTLIIKELDRLGRN
MDMIKDEWIALEKMGVNLIIIDNPMLSTNNKGDLDRKVISNIVFELMSYMAQKEREKILKRQAEGLAAMPVDNNGKKISM
KTKRAIGRPSLEYPSNWKETYDNWKSGEITAVKAMEFTELKKTSFYKLVKQYESK

Specific function: Potential DNA invertase [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 25263; Mature: 25263

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYGYIRVSSKKQNEERQRVALREYCEENKINMDFERDVITDEQSGKNFKREGYILLKE
CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
HLLRAGDTLIIKELDRLGRNMDMIKDEWIALEKMGVNLIIIDNPMLSTNNKGDLDRKVIS
HHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCHHHHHHH
NIVFELMSYMAQKEREKILKRQAEGLAAMPVDNNGKKISMKTKRAIGRPSLEYPSNWKET
HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEHHHHHCCCCCCCCCCCHHHH
YDNWKSGEITAVKAMEFTELKKTSFYKLVKQYESK
HCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTYGYIRVSSKKQNEERQRVALREYCEENKINMDFERDVITDEQSGKNFKREGYILLKE
CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
HLLRAGDTLIIKELDRLGRNMDMIKDEWIALEKMGVNLIIIDNPMLSTNNKGDLDRKVIS
HHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCHHHHHHH
NIVFELMSYMAQKEREKILKRQAEGLAAMPVDNNGKKISMKTKRAIGRPSLEYPSNWKET
HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEHHHHHCCCCCCCCCCCHHHH
YDNWKSGEITAVKAMEFTELKKTSFYKLVKQYESK
HCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2555186 [H]