| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is surE [H]
Identifier: 187934168
GI number: 187934168
Start: 3088709
End: 3089464
Strand: Reverse
Name: surE [H]
Synonym: CLL_A2994
Alternate gene names: 187934168
Gene position: 3089464-3088709 (Counterclockwise)
Preceding gene: 187935100
Following gene: 187933030
Centisome position: 81.29
GC content: 30.03
Gene sequence:
>756_bases ATGAATATTTTAATTACTAACGATGATGGGATAAGTGCTAGAGGAATAAAAACTTTAGCGGAAAAGATGTCAAAGAAACA TAATATAATAGTTGTTGCACCAAGAGAACAAAAAAGTGCATCAAGTCATTCTATATCTATTAATATACCAATTAAAATTA GAGAAGAAAAGATTGAGGGGTTAGATTGTAAGGCATATAGCCTTGTTGGAACACCTGCAGATTGTACTCAAGCAGGAATA TCATTGTTAGCTAAAGGTATTGATCTTGTTATTTCAGGAATAAATAGAGGATTCAATAGTGGAACTGATATCCTATATTC AGGAACTGTTTCAGCTGCTATAGAAGGAGCACTTTATGATGTACCATCCATTGCAATATCTATGGATGTGAAGTGGGACA GGGATGATGAAGATTACAGTAAAGCTGCTAATTGGGTGAGTAAAGTTGTTGATTTAGCCGAGAAAAAATATTTAAAGAAG AATGTGGTTTTAAATATCAATGTCCCTAATATTAATGAAGAAGATATTAAAGGATTAAAAGTATGTAAGATTGGAAAGTC AACATATAAAACAGAATATGTTCTTTTAGAAGAAGATAATGATAAAGTGTATCAAACTAGTGGTGTTAGAAATCAAGTAG AAAAAGATGAAAGTGATTTATACTTTTTATCTCAAGGATACGTAACATTAACACCTTTACATTTCGATTTTACAAATTTT AAGGAACTAAATGAAGTTAAGAAAATTTTTGAATAA
Upstream 100 bases:
>100_bases AGATAATTATAAACTTATAGTGCATAGTTAAATGAAAAATAATTACCATTTAATAAAAGTATTTGGTGAAATATATATGG TTTAATAATGGAGGGGAAAT
Downstream 100 bases:
>100_bases ATTATAGATTTTTTTAGGCTCTGTTTTATTGAAGTGTTTATATATGCACAAACAAAGTGGATTGAGTAATTGAACTTAAG AATACCACTTTTATTGCATA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNILITNDDGISARGIKTLAEKMSKKHNIIVVAPREQKSASSHSISINIPIKIREEKIEGLDCKAYSLVGTPADCTQAGI SLLAKGIDLVISGINRGFNSGTDILYSGTVSAAIEGALYDVPSIAISMDVKWDRDDEDYSKAANWVSKVVDLAEKKYLKK NVVLNINVPNINEEDIKGLKVCKIGKSTYKTEYVLLEEDNDKVYQTSGVRNQVEKDESDLYFLSQGYVTLTPLHFDFTNF KELNEVKKIFE
Sequences:
>Translated_251_residues MNILITNDDGISARGIKTLAEKMSKKHNIIVVAPREQKSASSHSISINIPIKIREEKIEGLDCKAYSLVGTPADCTQAGI SLLAKGIDLVISGINRGFNSGTDILYSGTVSAAIEGALYDVPSIAISMDVKWDRDDEDYSKAANWVSKVVDLAEKKYLKK NVVLNINVPNINEEDIKGLKVCKIGKSTYKTEYVLLEEDNDKVYQTSGVRNQVEKDESDLYFLSQGYVTLTPLHFDFTNF KELNEVKKIFE >Mature_251_residues MNILITNDDGISARGIKTLAEKMSKKHNIIVVAPREQKSASSHSISINIPIKIREEKIEGLDCKAYSLVGTPADCTQAGI SLLAKGIDLVISGINRGFNSGTDILYSGTVSAAIEGALYDVPSIAISMDVKWDRDDEDYSKAANWVSKVVDLAEKKYLKK NVVLNINVPNINEEDIKGLKVCKIGKSTYKTEYVLLEEDNDKVYQTSGVRNQVEKDESDLYFLSQGYVTLTPLHFDFTNF KELNEVKKIFE
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=242, Percent_Identity=33.8842975206612, Blast_Score=137, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 27888; Mature: 27888
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILITNDDGISARGIKTLAEKMSKKHNIIVVAPREQKSASSHSISINIPIKIREEKIEG CEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCCC LDCKAYSLVGTPADCTQAGISLLAKGIDLVISGINRGFNSGTDILYSGTVSAAIEGALYD CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHCCHHCC VPSIAISMDVKWDRDDEDYSKAANWVSKVVDLAEKKYLKKNVVLNINVPNINEEDIKGLK CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCEE VCKIGKSTYKTEYVLLEEDNDKVYQTSGVRNQVEKDESDLYFLSQGYVTLTPLHFDFTNF EEEECCCCCCEEEEEEECCCCCEEEECCCHHHHHCCCCCEEEEECCCEEEEEEEECCCCH KELNEVKKIFE HHHHHHHHHCC >Mature Secondary Structure MNILITNDDGISARGIKTLAEKMSKKHNIIVVAPREQKSASSHSISINIPIKIREEKIEG CEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCCC LDCKAYSLVGTPADCTQAGISLLAKGIDLVISGINRGFNSGTDILYSGTVSAAIEGALYD CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHCCHHCC VPSIAISMDVKWDRDDEDYSKAANWVSKVVDLAEKKYLKKNVVLNINVPNINEEDIKGLK CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCEE VCKIGKSTYKTEYVLLEEDNDKVYQTSGVRNQVEKDESDLYFLSQGYVTLTPLHFDFTNF EEEECCCCCCEEEEEEECCCCCEEEECCCHHHHHCCCCCEEEEECCCEEEEEEEECCCCH KELNEVKKIFE HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA