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The map label for this gene is ybjY [C]

Identifier: 187934135

GI number: 187934135

Start: 2908881

End: 2910329

Strand: Reverse

Name: ybjY [C]

Synonym: CLL_A2834

Alternate gene names: 187934135

Gene position: 2910329-2908881 (Counterclockwise)

Preceding gene: 187935205

Following gene: 187935652

Centisome position: 76.58

GC content: 28.16

Gene sequence:

>1449_bases
ATGAATAAAATAGAAATAAAAAATTTAAGTCCTAAAAATATTATTTTAAAAGTTAAAAATTCTAAAAAACGTATGAGTAA
AAAAAAGATGGTTATGTTATTTGTAGCTATTCTAGTTGTTGTAGGAATTACATTTAAGATGTTTTTTTCTAAACCTCCTA
ATGTACAAGCTCAAAATACTATTCTTAACAAAGCTAATATTGTTAATAGTATTAACGTTTTAGGAGAAGTAAAAAGTGAA
AATTCTACAAATGTTTATACAAATTCAGGTAATATAGTCAAAGAAGTTAAAGTTAAAGTTGGAGATGAAGTTAAGACTGG
AGATGTTCTAGCTATATTAGATACTGAAAAATTAAAAGAGGAAATAGAGCAATTAACAGAAACTTTGAGTGCTTCTGAGG
CGAATGGGAAGTTAGATCTTGATAGTAAAAAAAGAGCGTATGACAATATAGTTTACATAAATGAGAATAATCTTAATACA
GATCTTATAAATGCAAACTCAATGTTAGAAACAGCCAAAATCACTTTAGAAGATGCAGAAAGATTATATCAATATAACAA
GACAATTTTAGGCTATGGAGAGATATCTAATCAGGAATTTAAAAAATCAGAAAATGATTATAATAAAGCCAAAGATGATT
ATAACAAAGCTAATGTTGAGTTGGAAAATTCGAAACTAAAAATACAAGAAGATTTAAAAAATGCACAAAATAGCTATGAA
AGCGCTAAAATAGCTTATGAAAATAAAAGTGAACGTGTTGCACTTGAAAATAAAAAGAAAGAATTAGATGAATGCACAAT
TAAAGCTTCAGTAGATGGAACTATCACTACTGTTAATGCAACTGTAGGAAGCCCAAGCACAGGAACATTATTTAAAATAG
AAGATTTAAACAATTTGATTATAAAAGCATCTATTAAAGAAGTGGATATTGCTAATATAAAAGTTGGTCAAAAAACTATG
ATAAAAACAGATGCAACGGATGATTTAGAACTTTTAGGAGAAATAAGTGAAATAAGTCCTACAGCTAAAGTTGATGAACC
TATTGTACCTACTGGTAATTCTACAGCTAATAGTGGAGATGTTATTTTTGAAGCTAAAGTAAAAATTAATGAGATGGATG
AAAATATAAAGATAGGAATGAAAGCAAAATTAAATATTATTTTGGAAGAAAAAAATGATGTTTATGCAATTCCTCATGAG
AGCATAATCGAAAATGAAAATGGTCTTAGTATATATGTAGCTGAAGCACAAGAAGATAATAAGTATATTATTAAAGAGGT
GGCTATAAGCAAGGGAATGGAATCAGATTTTAATGTTGAAATCTATGGAGATGAACTACAAGATGGAATGAAAGTACTTT
CTGAACCAAGCAATTATACTGTTGGAAGTATAGTTGAACTAGGTGGAGGAATGGTTGAGCCTGTTGGAGGTGAGGTTATT
GAGCAATAA

Upstream 100 bases:

>100_bases
TAAAAATCAAGATTTTATATCACAAGTAAATAATTTATACATGGATTATTTAAGTTATATGAAAATGAAAGATGGATATT
AGAGTGGAGTGGTATAAATT

Downstream 100 bases:

>100_bases
TATAATTGAAATGAATAATATTGTAAAGAGCTTCTATATAGGAACTGAGAATCAATTAGATATTTTAAAAAACATTGATA
TAAATGTAAAAAAAGGCGAA

Product: HylD family protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; Efflux Transporter Rnd Family Mfp Subunit; Membrane Fusion Efflux Protein; Membrane-Associated Protein; HylD Family Protein; Acr Family Acridine Efflux Pump AcrA; Efflux System Protein; Secretion Protein HlyD Family Protein; Periplasmic Component Of Efflux System; RND Family Efflux Pump Membrane Fusion Protein; Auxiliary Transporter; Efflux Transporter; PAS/PAC Sensor Protein; Secreted Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MNKIEIKNLSPKNIILKVKNSKKRMSKKKMVMLFVAILVVVGITFKMFFSKPPNVQAQNTILNKANIVNSINVLGEVKSE
NSTNVYTNSGNIVKEVKVKVGDEVKTGDVLAILDTEKLKEEIEQLTETLSASEANGKLDLDSKKRAYDNIVYINENNLNT
DLINANSMLETAKITLEDAERLYQYNKTILGYGEISNQEFKKSENDYNKAKDDYNKANVELENSKLKIQEDLKNAQNSYE
SAKIAYENKSERVALENKKKELDECTIKASVDGTITTVNATVGSPSTGTLFKIEDLNNLIIKASIKEVDIANIKVGQKTM
IKTDATDDLELLGEISEISPTAKVDEPIVPTGNSTANSGDVIFEAKVKINEMDENIKIGMKAKLNIILEEKNDVYAIPHE
SIIENENGLSIYVAEAQEDNKYIIKEVAISKGMESDFNVEIYGDELQDGMKVLSEPSNYTVGSIVELGGGMVEPVGGEVI
EQ

Sequences:

>Translated_482_residues
MNKIEIKNLSPKNIILKVKNSKKRMSKKKMVMLFVAILVVVGITFKMFFSKPPNVQAQNTILNKANIVNSINVLGEVKSE
NSTNVYTNSGNIVKEVKVKVGDEVKTGDVLAILDTEKLKEEIEQLTETLSASEANGKLDLDSKKRAYDNIVYINENNLNT
DLINANSMLETAKITLEDAERLYQYNKTILGYGEISNQEFKKSENDYNKAKDDYNKANVELENSKLKIQEDLKNAQNSYE
SAKIAYENKSERVALENKKKELDECTIKASVDGTITTVNATVGSPSTGTLFKIEDLNNLIIKASIKEVDIANIKVGQKTM
IKTDATDDLELLGEISEISPTAKVDEPIVPTGNSTANSGDVIFEAKVKINEMDENIKIGMKAKLNIILEEKNDVYAIPHE
SIIENENGLSIYVAEAQEDNKYIIKEVAISKGMESDFNVEIYGDELQDGMKVLSEPSNYTVGSIVELGGGMVEPVGGEVI
EQ
>Mature_482_residues
MNKIEIKNLSPKNIILKVKNSKKRMSKKKMVMLFVAILVVVGITFKMFFSKPPNVQAQNTILNKANIVNSINVLGEVKSE
NSTNVYTNSGNIVKEVKVKVGDEVKTGDVLAILDTEKLKEEIEQLTETLSASEANGKLDLDSKKRAYDNIVYINENNLNT
DLINANSMLETAKITLEDAERLYQYNKTILGYGEISNQEFKKSENDYNKAKDDYNKANVELENSKLKIQEDLKNAQNSYE
SAKIAYENKSERVALENKKKELDECTIKASVDGTITTVNATVGSPSTGTLFKIEDLNNLIIKASIKEVDIANIKVGQKTM
IKTDATDDLELLGEISEISPTAKVDEPIVPTGNSTANSGDVIFEAKVKINEMDENIKIGMKAKLNIILEEKNDVYAIPHE
SIIENENGLSIYVAEAQEDNKYIIKEVAISKGMESDFNVEIYGDELQDGMKVLSEPSNYTVGSIVELGGGMVEPVGGEVI
EQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53358; Mature: 53358

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIEIKNLSPKNIILKVKNSKKRMSKKKMVMLFVAILVVVGITFKMFFSKPPNVQAQNT
CCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ILNKANIVNSINVLGEVKSENSTNVYTNSGNIVKEVKVKVGDEVKTGDVLAILDTEKLKE
HHHHHHHHHHHHHEEEECCCCCCEEEECCCCEEEEEEEEECCCCCCCCEEEEECHHHHHH
EIEQLTETLSASEANGKLDLDSKKRAYDNIVYINENNLNTDLINANSMLETAKITLEDAE
HHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEECCCCCCEEECCCCHHHHEEEEHHHHH
RLYQYNKTILGYGEISNQEFKKSENDYNKAKDDYNKANVELENSKLKIQEDLKNAQNSYE
HHHHHCCEEEEECCCCCHHHHCCCCHHHHCCCCCCCCCEEEECCEEEEHHHHHHHHCCCC
SAKIAYENKSERVALENKKKELDECTIKASVDGTITTVNATVGSPSTGTLFKIEDLNNLI
CEEEEECCCCCEEEEHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCEEEEECCCCEE
IKASIKEVDIANIKVGQKTMIKTDATDDLELLGEISEISPTAKVDEPIVPTGNSTANSGD
EEEECCEEEEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VIFEAKVKINEMDENIKIGMKAKLNIILEEKNDVYAIPHESIIENENGLSIYVAEAQEDN
EEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEEECCCHHHHCCCCCCEEEEEECCCCC
KYIIKEVAISKGMESDFNVEIYGDELQDGMKVLSEPSNYTVGSIVELGGGMVEPVGGEVI
CEEHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCHHHHHHHCCCEECCCCCHHH
EQ
CC
>Mature Secondary Structure
MNKIEIKNLSPKNIILKVKNSKKRMSKKKMVMLFVAILVVVGITFKMFFSKPPNVQAQNT
CCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ILNKANIVNSINVLGEVKSENSTNVYTNSGNIVKEVKVKVGDEVKTGDVLAILDTEKLKE
HHHHHHHHHHHHHEEEECCCCCCEEEECCCCEEEEEEEEECCCCCCCCEEEEECHHHHHH
EIEQLTETLSASEANGKLDLDSKKRAYDNIVYINENNLNTDLINANSMLETAKITLEDAE
HHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEECCCCCCEEECCCCHHHHEEEEHHHHH
RLYQYNKTILGYGEISNQEFKKSENDYNKAKDDYNKANVELENSKLKIQEDLKNAQNSYE
HHHHHCCEEEEECCCCCHHHHCCCCHHHHCCCCCCCCCEEEECCEEEEHHHHHHHHCCCC
SAKIAYENKSERVALENKKKELDECTIKASVDGTITTVNATVGSPSTGTLFKIEDLNNLI
CEEEEECCCCCEEEEHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCEEEEECCCCEE
IKASIKEVDIANIKVGQKTMIKTDATDDLELLGEISEISPTAKVDEPIVPTGNSTANSGD
EEEECCEEEEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VIFEAKVKINEMDENIKIGMKAKLNIILEEKNDVYAIPHESIIENENGLSIYVAEAQEDN
EEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEEECCCHHHHCCCCCCEEEEEECCCCC
KYIIKEVAISKGMESDFNVEIYGDELQDGMKVLSEPSNYTVGSIVELGGGMVEPVGGEVI
CEEHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCHHHHHHHCCCEECCCCCHHH
EQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA