| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934131
Identifier: 187934131
GI number: 187934131
Start: 2171916
End: 2172389
Strand: Reverse
Name: 187934131
Synonym: CLL_A2077
Alternate gene names: NA
Gene position: 2172389-2171916 (Counterclockwise)
Preceding gene: 187932350
Following gene: 187935201
Centisome position: 57.16
GC content: 25.11
Gene sequence:
>474_bases ATGGGAAGAAGATATACTATAAAATGTTCAAATTGCAATTACAATAAATGTCTTACACTAGGAATAGGAATGTTGTATTC TACTAAGAATGTTTTTTACAAAAGTGATTTTAATAATAGTAAACCTATGTTAGAAACTTTAGTTAGAAGTAAAAGGATAA AAGAAAATGTGTTAAAGTTAATAGATAGTGGTGGAATTCCAAGTGAAAATTATAAACATAATGTTTATTGCTGTACTAAT TGCAATGAGATTTATAGTCGATTTTATTTTTGTATTATATCTGAAGGCAAAGTATATGAACCAGAATACCATTGTTCAAA ATGTAAGCGTATTTTAAATAAAGTAAGAATAATAAGTGAAAAAGATAATCTGAAAATATTTGATGAGCATAAGGAATACT CATGGAAATGTCCTATTTGTGGTTGTAATAAATTAGAAATTGATAATGATAGTGGTATTTTAATGTGGGATTAA
Upstream 100 bases:
>100_bases CAGAATGGTATCAACCAATAATATTTGTTATTGAAAGAAATGATTTGAAAAGATATATAATTAAATAAATAATTTTTTAG TGCTAAAAGGGAGAATTTAC
Downstream 100 bases:
>100_bases GATAATCAAAGAATTTAATCAAATATCACATAGATTAAGAAAAATGCTAATAAAGCTTAATTAAGTTTAAGTTTTATTAG CATTTTTAGTGCAGTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MGRRYTIKCSNCNYNKCLTLGIGMLYSTKNVFYKSDFNNSKPMLETLVRSKRIKENVLKLIDSGGIPSENYKHNVYCCTN CNEIYSRFYFCIISEGKVYEPEYHCSKCKRILNKVRIISEKDNLKIFDEHKEYSWKCPICGCNKLEIDNDSGILMWD
Sequences:
>Translated_157_residues MGRRYTIKCSNCNYNKCLTLGIGMLYSTKNVFYKSDFNNSKPMLETLVRSKRIKENVLKLIDSGGIPSENYKHNVYCCTN CNEIYSRFYFCIISEGKVYEPEYHCSKCKRILNKVRIISEKDNLKIFDEHKEYSWKCPICGCNKLEIDNDSGILMWD >Mature_156_residues GRRYTIKCSNCNYNKCLTLGIGMLYSTKNVFYKSDFNNSKPMLETLVRSKRIKENVLKLIDSGGIPSENYKHNVYCCTNC NEIYSRFYFCIISEGKVYEPEYHCSKCKRILNKVRIISEKDNLKIFDEHKEYSWKCPICGCNKLEIDNDSGILMWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18453; Mature: 18321
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRYTIKCSNCNYNKCLTLGIGMLYSTKNVFYKSDFNNSKPMLETLVRSKRIKENVLKL CCCEEEEEECCCCCCEEEEEEHHEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH IDSGGIPSENYKHNVYCCTNCNEIYSRFYFCIISEGKVYEPEYHCSKCKRILNKVRIISE HHCCCCCCCCCCCCEEEECCHHHHHHHEEEEEECCCCEECCCHHHHHHHHHHHHHEEECC KDNLKIFDEHKEYSWKCPICGCNKLEIDNDSGILMWD CCCEEEEECCCCCEEECCCCCCCEEEEECCCCEEEEC >Mature Secondary Structure GRRYTIKCSNCNYNKCLTLGIGMLYSTKNVFYKSDFNNSKPMLETLVRSKRIKENVLKL CCEEEEEECCCCCCEEEEEEHHEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH IDSGGIPSENYKHNVYCCTNCNEIYSRFYFCIISEGKVYEPEYHCSKCKRILNKVRIISE HHCCCCCCCCCCCCEEEECCHHHHHHHEEEEEECCCCEECCCHHHHHHHHHHHHHEEECC KDNLKIFDEHKEYSWKCPICGCNKLEIDNDSGILMWD CCCEEEEECCCCCEEECCCCCCCEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA