| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934061
Identifier: 187934061
GI number: 187934061
Start: 2341803
End: 2342192
Strand: Reverse
Name: 187934061
Synonym: CLL_A2254
Alternate gene names: NA
Gene position: 2342192-2341803 (Counterclockwise)
Preceding gene: 187934729
Following gene: 187935702
Centisome position: 61.63
GC content: 32.56
Gene sequence:
>390_bases ATGTCAATAGTACAAATTGATAGCCTTGCTGATGCAATTAATCAAGAATTAAGTCTGTATTCAGCTAGTGTTACTAAAAA AACTAAAAGTAATGTTGATAAAGTATCCAAAGAAGTAGATGAAGAGATAAAAAAGCATATTACATTTAAGCAACCAACGG GAAAATATGTTAAAGCCTTTAGAATTAATAATTCATATGAAGGTCCATTCACAAAGAGAAAAACATGGCATGTTAAATCA CCATATTATAGACTTACTCATCTGCTTGAAAAAGGTCATGCTCTTGCTGGTGGTGGAAGAACGAAGGCATATCCACATAT TAAATATGGGGAAGATTTAGCCAAAAAAAGAATGGAACAATTAACAAAGGAGGCTGTACAGGGTGACTAA
Upstream 100 bases:
>100_bases AAGGTAGAGGTAAGTTTTCAATTGAACTTGTACAGGATAAATATGAATGTAATCCTCCAAGCTTAGATTTAACATTAAGG CAATTAGAGGTACATGAATA
Downstream 100 bases:
>100_bases GATAAAAGAATGGTTAGAAACTACTAAATTAAATGTTGCTGAAACTTGTTTTAAAAAAGCTCCTAAGCTTCCATATATTA TTTTTACTATGGATGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSIVQIDSLADAINQELSLYSASVTKKTKSNVDKVSKEVDEEIKKHITFKQPTGKYVKAFRINNSYEGPFTKRKTWHVKS PYYRLTHLLEKGHALAGGGRTKAYPHIKYGEDLAKKRMEQLTKEAVQGD
Sequences:
>Translated_129_residues MSIVQIDSLADAINQELSLYSASVTKKTKSNVDKVSKEVDEEIKKHITFKQPTGKYVKAFRINNSYEGPFTKRKTWHVKS PYYRLTHLLEKGHALAGGGRTKAYPHIKYGEDLAKKRMEQLTKEAVQGD >Mature_128_residues SIVQIDSLADAINQELSLYSASVTKKTKSNVDKVSKEVDEEIKKHITFKQPTGKYVKAFRINNSYEGPFTKRKTWHVKSP YYRLTHLLEKGHALAGGGRTKAYPHIKYGEDLAKKRMEQLTKEAVQGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14684; Mature: 14553
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVQIDSLADAINQELSLYSASVTKKTKSNVDKVSKEVDEEIKKHITFKQPTGKYVKAF CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE RINNSYEGPFTKRKTWHVKSPYYRLTHLLEKGHALAGGGRTKAYPHIKYGEDLAKKRMEQ ECCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LTKEAVQGD HHHHHHCCC >Mature Secondary Structure SIVQIDSLADAINQELSLYSASVTKKTKSNVDKVSKEVDEEIKKHITFKQPTGKYVKAF CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE RINNSYEGPFTKRKTWHVKSPYYRLTHLLEKGHALAGGGRTKAYPHIKYGEDLAKKRMEQ ECCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LTKEAVQGD HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA