| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is divIVA [H]
Identifier: 187934008
GI number: 187934008
Start: 2518393
End: 2519013
Strand: Reverse
Name: divIVA [H]
Synonym: CLL_A2433
Alternate gene names: 187934008
Gene position: 2519013-2518393 (Counterclockwise)
Preceding gene: 187934764
Following gene: 187932847
Centisome position: 66.28
GC content: 26.73
Gene sequence:
>621_bases ATGAAATTAACACCAATGGATATAACAAATAAAGAATTCAAAAAAGGATTAAGAGGATATAACGTAGAAGAAGTTGATGA ATTTTTAGATGAAATAGTAGAAAATTATGAAGAGCTATACAAGGAAAATTCTAATTTAAAAGAAAAGTTAACAAATATGC AAGAAAAAATTGATCATTATTCACAAATTGAAACAACAATTCAAAACACATTAGTTTTAGCACAAAATGCAGCAGAACAA GCTAAGAGTAGTGCACAAAAAGAAGCAGAGATGGTACTTAAAAATGCCAATGAAACTGCTCAAAAAGTTCTTGATAAATC TCATAATGATGTTATTGGCATTAATGATGAATATGAAAGAGTTAAACAAGAATTTATTAAATTTAGAGCAAAATATAGAA ACTTCATGAATACTCAACTTGAAACTTTTGATGATTTAGAAAAAGATTTTATAAAAAATTACAATGTTTCAGAACCTATT GATGATGGTGATATGAAAGAAAAGGACATTGTTGATCAAGAAGTAGCAATAGAAATTTCAGATGAGGACTTGATTGATTA CGATAAAAATTCACTTACTGAGGATTTAAGCGAAATAAAAAGCTTTTTTGCTAAGGAGTAA
Upstream 100 bases:
>100_bases AGAGGAATTGGAAAATTCATTATAGGAGAAGTTATTGGAAGCAGTAAAAGCGGAAAATATAAACTGATTATAAAAAAATA TACATAGTTGAGGTGAGTTT
Downstream 100 bases:
>100_bases AATTTATATTATGTAAGTCTATTTACCTTTAAATTGTTATGCATAATTACAGTTTAAAGGTATTTTTATTTGTTATATAA AAAACATAATTTAATAATAG
Product: minicell-associated protein
Products: NA
Alternate protein names: Cell division initiation protein divIVA; Minicell-associated protein divIVA [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKLTPMDITNKEFKKGLRGYNVEEVDEFLDEIVENYEELYKENSNLKEKLTNMQEKIDHYSQIETTIQNTLVLAQNAAEQ AKSSAQKEAEMVLKNANETAQKVLDKSHNDVIGINDEYERVKQEFIKFRAKYRNFMNTQLETFDDLEKDFIKNYNVSEPI DDGDMKEKDIVDQEVAIEISDEDLIDYDKNSLTEDLSEIKSFFAKE
Sequences:
>Translated_206_residues MKLTPMDITNKEFKKGLRGYNVEEVDEFLDEIVENYEELYKENSNLKEKLTNMQEKIDHYSQIETTIQNTLVLAQNAAEQ AKSSAQKEAEMVLKNANETAQKVLDKSHNDVIGINDEYERVKQEFIKFRAKYRNFMNTQLETFDDLEKDFIKNYNVSEPI DDGDMKEKDIVDQEVAIEISDEDLIDYDKNSLTEDLSEIKSFFAKE >Mature_206_residues MKLTPMDITNKEFKKGLRGYNVEEVDEFLDEIVENYEELYKENSNLKEKLTNMQEKIDHYSQIETTIQNTLVLAQNAAEQ AKSSAQKEAEMVLKNANETAQKVLDKSHNDVIGINDEYERVKQEFIKFRAKYRNFMNTQLETFDDLEKDFIKNYNVSEPI DDGDMKEKDIVDQEVAIEISDEDLIDYDKNSLTEDLSEIKSFFAKE
Specific function: May act as a pilot protein, directing minCD to the polar septation sites or by inhibiting minCD at the midcell site of division. Required for polar localization of the chromosome during sporulation [H]
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasm. Note=Localized at the cell division site and found exclusively at the cell pole during sporulation [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gpsB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007793 - InterPro: IPR019933 [H]
Pfam domain/function: PF05103 DivIVA [H]
EC number: NA
Molecular weight: Translated: 24121; Mature: 24121
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTPMDITNKEFKKGLRGYNVEEVDEFLDEIVENYEELYKENSNLKEKLTNMQEKIDHY CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SQIETTIQNTLVLAQNAAEQAKSSAQKEAEMVLKNANETAQKVLDKSHNDVIGINDEYER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHH VKQEFIKFRAKYRNFMNTQLETFDDLEKDFIKNYNVSEPIDDGDMKEKDIVDQEVAIEIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHEEEEC DEDLIDYDKNSLTEDLSEIKSFFAKE CCHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLTPMDITNKEFKKGLRGYNVEEVDEFLDEIVENYEELYKENSNLKEKLTNMQEKIDHY CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SQIETTIQNTLVLAQNAAEQAKSSAQKEAEMVLKNANETAQKVLDKSHNDVIGINDEYER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHH VKQEFIKFRAKYRNFMNTQLETFDDLEKDFIKNYNVSEPIDDGDMKEKDIVDQEVAIEIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHEEEEC DEDLIDYDKNSLTEDLSEIKSFFAKE CCHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9045828; 9219999; 9384377 [H]