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The map label for this gene is yicO [C]

Identifier: 187933970

GI number: 187933970

Start: 2043468

End: 2044763

Strand: Reverse

Name: yicO [C]

Synonym: CLL_A1967

Alternate gene names: 187933970

Gene position: 2044763-2043468 (Counterclockwise)

Preceding gene: 187933223

Following gene: 187935247

Centisome position: 53.8

GC content: 31.87

Gene sequence:

>1296_bases
ATGTTAGATAATTATTTCGGACTTACTAGAAACAACACAAATGTTAAGACAGAAATCGTAGCTGGTATTACTACATTTAT
GACGATGGCGTACATATTAATAGTAAATCCATCTATATTATCTGCTGCTGGAATGGATACAGGCGCAGTGTTTACAGCAA
CAGCATTATCAGCTGTAGTTGCAACTTTAGTTATGGGATTATATGCTAAACTGCCATTTGCACAAGCACCAGGTATGGGA
TTAAATGCATTTTTTGCATTTACGATAGTACTTAACATGGGATATTCATATGAATTTGCATTAACAGCAGTACTTTTAGA
AGGTATTATATTTATATTGTTAACTTTATTCAATGTGCGTGAAGCTATTGTTGATTCAATACCAGAGAACATTAAAAAGG
CAATTTCAGTTGGTATTGGTTTACTTATTGCTTTAATAGGACTTGAAGGAGCAGGGATCATAACTCATCCTAAAGATAAT
TCTACAATTCTTTCACTTGGAAATATAACAAGTGGAACAGCACTACTTGCTATAATAGGTATTATAATTACAGGTATTCT
TTTAGCAAAGAATATAAAAGGAGCATTATTTATAGGAATGCTTGCTACAGCTATTATAGGAATTCCTTTTGGAATTACAC
CAATTCCTACTAGCATAATGAGTGCACCGCCATCAATTAGTTCTGTATTATTTAAATTTGAATGGCACAATATATTTTCT
TTAGATATGGTAGTTGTATTATTCACATTACTTTTTATGGATATGTTTGATACCATAGGAACTTTAGTTGGAGTAACAAC
TAAAGCAAAGATGTTAGATGAGAATGGAAAAGTTCCAAACATAAAAAAAGCTCTTTTTGCAGATGCAATAGGAACTACAT
TTGGAGCATGTGTTGGTACGAGTACAGTTAGTACATTTGTAGAAAGTGCATCAGGAGTTGCAGAGGGTGGAAGAACAGGG
TTAACAGCTGTTTCTACTGCAATAATGTTTGGATTAGCATTATTCTTCTCACCTATATTTGCAACAATTACTCCAGCAGT
TACGTGTTCTGCATTAGTATTGGTTGGACTGTTTATGATTGAACCAATAAAAGAAATAGATATATCTGATTTTACAGAAG
CTATACCAGCATTTTTAACTATAATTATGATGCCATTATCTTATAGCATATCAGATGGTATAGTATTTGGAGTTATTTCG
TACATATTGTTAAAACTTTTTACTGGAAAAGTAAAAGATATAAGCGTAGCTACAGTAGTAATAGGATTAGTATTTGTAAT
GAAATTCTTAATTTAA

Upstream 100 bases:

>100_bases
AAAGTGTTGCAATATATCGAAAAATATCTTATTATAGTTCAGGTGGAAAAAAGATTTACGAAAGAGTGGTTTTATGAAAA
AAATATTTGAAAAGAACGGA

Downstream 100 bases:

>100_bases
TAATTAATAAATTTAAAAAACTTCCCTTTAACTATTTAAAGTTAAAAGGAAGTTTTTTGTAATCATAATATAAAATAACA
GTCGTAATTTGATGAAAAAA

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MLDNYFGLTRNNTNVKTEIVAGITTFMTMAYILIVNPSILSAAGMDTGAVFTATALSAVVATLVMGLYAKLPFAQAPGMG
LNAFFAFTIVLNMGYSYEFALTAVLLEGIIFILLTLFNVREAIVDSIPENIKKAISVGIGLLIALIGLEGAGIITHPKDN
STILSLGNITSGTALLAIIGIIITGILLAKNIKGALFIGMLATAIIGIPFGITPIPTSIMSAPPSISSVLFKFEWHNIFS
LDMVVVLFTLLFMDMFDTIGTLVGVTTKAKMLDENGKVPNIKKALFADAIGTTFGACVGTSTVSTFVESASGVAEGGRTG
LTAVSTAIMFGLALFFSPIFATITPAVTCSALVLVGLFMIEPIKEIDISDFTEAIPAFLTIIMMPLSYSISDGIVFGVIS
YILLKLFTGKVKDISVATVVIGLVFVMKFLI

Sequences:

>Translated_431_residues
MLDNYFGLTRNNTNVKTEIVAGITTFMTMAYILIVNPSILSAAGMDTGAVFTATALSAVVATLVMGLYAKLPFAQAPGMG
LNAFFAFTIVLNMGYSYEFALTAVLLEGIIFILLTLFNVREAIVDSIPENIKKAISVGIGLLIALIGLEGAGIITHPKDN
STILSLGNITSGTALLAIIGIIITGILLAKNIKGALFIGMLATAIIGIPFGITPIPTSIMSAPPSISSVLFKFEWHNIFS
LDMVVVLFTLLFMDMFDTIGTLVGVTTKAKMLDENGKVPNIKKALFADAIGTTFGACVGTSTVSTFVESASGVAEGGRTG
LTAVSTAIMFGLALFFSPIFATITPAVTCSALVLVGLFMIEPIKEIDISDFTEAIPAFLTIIMMPLSYSISDGIVFGVIS
YILLKLFTGKVKDISVATVVIGLVFVMKFLI
>Mature_431_residues
MLDNYFGLTRNNTNVKTEIVAGITTFMTMAYILIVNPSILSAAGMDTGAVFTATALSAVVATLVMGLYAKLPFAQAPGMG
LNAFFAFTIVLNMGYSYEFALTAVLLEGIIFILLTLFNVREAIVDSIPENIKKAISVGIGLLIALIGLEGAGIITHPKDN
STILSLGNITSGTALLAIIGIIITGILLAKNIKGALFIGMLATAIIGIPFGITPIPTSIMSAPPSISSVLFKFEWHNIFS
LDMVVVLFTLLFMDMFDTIGTLVGVTTKAKMLDENGKVPNIKKALFADAIGTTFGACVGTSTVSTFVESASGVAEGGRTG
LTAVSTAIMFGLALFFSPIFATITPAVTCSALVLVGLFMIEPIKEIDISDFTEAIPAFLTIIMMPLSYSISDGIVFGVIS
YILLKLFTGKVKDISVATVVIGLVFVMKFLI

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=430, Percent_Identity=41.3953488372093, Blast_Score=351, Evalue=5e-98,
Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=42.0560747663551, Blast_Score=347, Evalue=1e-96,
Organism=Escherichia coli, GI1790499, Length=436, Percent_Identity=33.4862385321101, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI48994909, Length=428, Percent_Identity=33.411214953271, Blast_Score=206, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 45402; Mature: 45402

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNYFGLTRNNTNVKTEIVAGITTFMTMAYILIVNPSILSAAGMDTGAVFTATALSAVV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH
ATLVMGLYAKLPFAQAPGMGLNAFFAFTIVLNMGYSYEFALTAVLLEGIIFILLTLFNVR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAIVDSIPENIKKAISVGIGLLIALIGLEGAGIITHPKDNSTILSLGNITSGTALLAIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHH
IIITGILLAKNIKGALFIGMLATAIIGIPFGITPIPTSIMSAPPSISSVLFKFEWHNIFS
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCHHH
LDMVVVLFTLLFMDMFDTIGTLVGVTTKAKMLDENGKVPNIKKALFADAIGTTFGACVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
STVSTFVESASGVAEGGRTGLTAVSTAIMFGLALFFSPIFATITPAVTCSALVLVGLFMI
HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPIKEIDISDFTEAIPAFLTIIMMPLSYSISDGIVFGVISYILLKLFTGKVKDISVATVV
CCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IGLVFVMKFLI
HHHHHHHHHHC
>Mature Secondary Structure
MLDNYFGLTRNNTNVKTEIVAGITTFMTMAYILIVNPSILSAAGMDTGAVFTATALSAVV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH
ATLVMGLYAKLPFAQAPGMGLNAFFAFTIVLNMGYSYEFALTAVLLEGIIFILLTLFNVR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAIVDSIPENIKKAISVGIGLLIALIGLEGAGIITHPKDNSTILSLGNITSGTALLAIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHH
IIITGILLAKNIKGALFIGMLATAIIGIPFGITPIPTSIMSAPPSISSVLFKFEWHNIFS
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCHHH
LDMVVVLFTLLFMDMFDTIGTLVGVTTKAKMLDENGKVPNIKKALFADAIGTTFGACVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
STVSTFVESASGVAEGGRTGLTAVSTAIMFGLALFFSPIFATITPAVTCSALVLVGLFMI
HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPIKEIDISDFTEAIPAFLTIIMMPLSYSISDGIVFGVISYILLKLFTGKVKDISVATVV
CCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IGLVFVMKFLI
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]