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The map label for this gene is sspC1 [H]

Identifier: 187933920

GI number: 187933920

Start: 804334

End: 804531

Strand: Reverse

Name: sspC1 [H]

Synonym: CLL_A0787

Alternate gene names: 187933920

Gene position: 804531-804334 (Counterclockwise)

Preceding gene: 187933211

Following gene: 187933037

Centisome position: 21.17

GC content: 32.83

Gene sequence:

>198_bases
ATGAATAATAATACTGGAAGCAATAACAATGTAGTACCAGAAGCAAAAGGTAAATTAGCACAATTCAAAAATGAAGTTGC
TAATGAAATGGGAGTACCTTTTAAAGAATATAACGGAGACCTAAGTTCAAAACAATGCGGAAGCGTTGGTGGAGAAATGG
TTAAGAGAATGGTACAACAATATGAAAACAACATCTAA

Upstream 100 bases:

>100_bases
CTATTTTATATTTTCTAATTAAATCCTTGTTTACCTTAATTTTTATAATATAAAATTCTATTTTTTTACGCAAGCTATCA
ATATAGAGGAGGTGAAGAAA

Downstream 100 bases:

>100_bases
CTATTTAGCACTCCTATAATAAAAGGTGTATTGAAATAATTTAATATTTCAATACACCTTTTATTATGTATGTTTATAAA
AATTGCATTTATCTTAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: ASSP; SASP; SSP-2 [H]

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNNNTGSNNNVVPEAKGKLAQFKNEVANEMGVPFKEYNGDLSSKQCGSVGGEMVKRMVQQYENNI

Sequences:

>Translated_65_residues
MNNNTGSNNNVVPEAKGKLAQFKNEVANEMGVPFKEYNGDLSSKQCGSVGGEMVKRMVQQYENNI
>Mature_65_residues
MNNNTGSNNNVVPEAKGKLAQFKNEVANEMGVPFKEYNGDLSSKQCGSVGGEMVKRMVQQYENNI

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 7139; Mature: 7139

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNTGSNNNVVPEAKGKLAQFKNEVANEMGVPFKEYNGDLSSKQCGSVGGEMVKRMVQQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
YENNI
HHCCC
>Mature Secondary Structure
MNNNTGSNNNVVPEAKGKLAQFKNEVANEMGVPFKEYNGDLSSKQCGSVGGEMVKRMVQQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
YENNI
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2401406; 2037223; 11792842 [H]