| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933909
Identifier: 187933909
GI number: 187933909
Start: 3639088
End: 3640302
Strand: Reverse
Name: 187933909
Synonym: CLL_A3441
Alternate gene names: NA
Gene position: 3640302-3639088 (Counterclockwise)
Preceding gene: 187934229
Following gene: 187933145
Centisome position: 95.79
GC content: 25.35
Gene sequence:
>1215_bases ATGATATTTTTATTAATAAAGAATGAACTTATAAAAATACTTAAAAGAACAAAAACATGGATTGTATTTGGATTATTTTT AGTATTTATGGGAGTTTGTATATTTGGTTTATATTATGAAGATAAAAATATGCAAAAGTATAATTCTCCACAGTATAAAA TAGAACAAATACAAAAGAGCATTAACTATACAGAAGAAGAAATGAGTAAAATAGAAAATAGTAAAGATACAGAATATTTA AATACACTTAAAGATGACTTAAAGCATTATGAAGAAGAAAAGATAAAATATGAAAATCAAATAAAAAATCAAGACAATGT AGAACAATGGAAAGTAGAAATTACAGAAGAAATAAAAGGACACGAGGAAAATTTAAAAAATAAGAACATTACAGAAGACG ATAAAACTTGGATTTCAGAAAGAATAAATAAACTTAAATACTTAGAGCAAAATGATATAAAGCCATTATACGGATATGAA TTTAATGCATACAATTATATAGATACAGTGGTGACTATATTAGGGCTAGCTTTGTTAGCTGTAGGAATATCTGTATTTAT GAGTGATATTGTATCGGGAGAATATAATCCACCAACATTAAAATTCTTGTTAGTGCAACCAGTATCAAGAGGAAAAGTAC TGTTATCTAAATTTGTAGCAGTTACAATTACTGCATTAACAATGATTATGTCAACAGAAGTTCTAGCATTTTTAGGAATT GGAATTTCAACTGGATTTAATTCAGGAACTTATCCAAAAACAATGGGAGTAAGATATGCTTTAGATTCTTCAAATATAGC AACTCAAAGGTATCCAGATTTAATTAGAATATCTAATACGGGAAACATAGGAACATTTAATGAGTTAATAATAAAAGCTT TGTTATTACAAATTTTATTTATAATAACTTGTTGCTCTGTAGTATTTTTAATATCCACATTATCTAAAAATAGCAATATA ACAACTGCTATATCAATTATAATAACAGCATCAGGAACTATAATATTTCAAATATTTAATTTTTCATCAAAGTTTGCACA TCTTATATTCCTAAGTTATGCTTCCGTAGGGTCAGTGATAACTGGAGATATAGCATATATGTATAGAAATGTGAATATAA CTCCGTATAATGGAATAATTGTAATGCTAGCAACAACGATAATTAGTTATACAATTGCACATATTGTATTTAAAAATAAA GAAATATTAATTTAA
Upstream 100 bases:
>100_bases AAAATTGGTAAGCGAAAATATAGAAATTTGTGAGGTTTATAAAAATAAGCAAGAGTTAGAAGAAAGATATATGGAGCTTA TGAATGGAGGATCTATTTAA
Downstream 100 bases:
>100_bases AGCTTTGAGTTTATGTTTATAATAATGGTATTATAATTTAGTAGTAAATAATTATATATTATAATTTCAGAGAAAGGAAT TGATGTTATGCCAGCGGGAA
Product: ABC transporter permease
Products: NA
Alternate protein names: Permease; ABC Transporter Permease; Lipoprotein; ABC Transporter-Like Membrane Protein; Related ABC Transporter Permease Component; Bacitracin Transport Permease BcrB
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MIFLLIKNELIKILKRTKTWIVFGLFLVFMGVCIFGLYYEDKNMQKYNSPQYKIEQIQKSINYTEEEMSKIENSKDTEYL NTLKDDLKHYEEEKIKYENQIKNQDNVEQWKVEITEEIKGHEENLKNKNITEDDKTWISERINKLKYLEQNDIKPLYGYE FNAYNYIDTVVTILGLALLAVGISVFMSDIVSGEYNPPTLKFLLVQPVSRGKVLLSKFVAVTITALTMIMSTEVLAFLGI GISTGFNSGTYPKTMGVRYALDSSNIATQRYPDLIRISNTGNIGTFNELIIKALLLQILFIITCCSVVFLISTLSKNSNI TTAISIIITASGTIIFQIFNFSSKFAHLIFLSYASVGSVITGDIAYMYRNVNITPYNGIIVMLATTIISYTIAHIVFKNK EILI
Sequences:
>Translated_404_residues MIFLLIKNELIKILKRTKTWIVFGLFLVFMGVCIFGLYYEDKNMQKYNSPQYKIEQIQKSINYTEEEMSKIENSKDTEYL NTLKDDLKHYEEEKIKYENQIKNQDNVEQWKVEITEEIKGHEENLKNKNITEDDKTWISERINKLKYLEQNDIKPLYGYE FNAYNYIDTVVTILGLALLAVGISVFMSDIVSGEYNPPTLKFLLVQPVSRGKVLLSKFVAVTITALTMIMSTEVLAFLGI GISTGFNSGTYPKTMGVRYALDSSNIATQRYPDLIRISNTGNIGTFNELIIKALLLQILFIITCCSVVFLISTLSKNSNI TTAISIIITASGTIIFQIFNFSSKFAHLIFLSYASVGSVITGDIAYMYRNVNITPYNGIIVMLATTIISYTIAHIVFKNK EILI >Mature_404_residues MIFLLIKNELIKILKRTKTWIVFGLFLVFMGVCIFGLYYEDKNMQKYNSPQYKIEQIQKSINYTEEEMSKIENSKDTEYL NTLKDDLKHYEEEKIKYENQIKNQDNVEQWKVEITEEIKGHEENLKNKNITEDDKTWISERINKLKYLEQNDIKPLYGYE FNAYNYIDTVVTILGLALLAVGISVFMSDIVSGEYNPPTLKFLLVQPVSRGKVLLSKFVAVTITALTMIMSTEVLAFLGI GISTGFNSGTYPKTMGVRYALDSSNIATQRYPDLIRISNTGNIGTFNELIIKALLLQILFIITCCSVVFLISTLSKNSNI TTAISIIITASGTIIFQIFNFSSKFAHLIFLSYASVGSVITGDIAYMYRNVNITPYNGIIVMLATTIISYTIAHIVFKNK EILI
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46033; Mature: 46033
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFLLIKNELIKILKRTKTWIVFGLFLVFMGVCIFGLYYEDKNMQKYNSPQYKIEQIQKS CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHH INYTEEEMSKIENSKDTEYLNTLKDDLKHYEEEKIKYENQIKNQDNVEQWKVEITEEIKG HCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC HEENLKNKNITEDDKTWISERINKLKYLEQNDIKPLYGYEFNAYNYIDTVVTILGLALLA CHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VGISVFMSDIVSGEYNPPTLKFLLVQPVSRGKVLLSKFVAVTITALTMIMSTEVLAFLGI HHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISTGFNSGTYPKTMGVRYALDSSNIATQRYPDLIRISNTGNIGTFNELIIKALLLQILF HHHCCCCCCCCCCCCCEEEEECCCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH IITCCSVVFLISTLSKNSNITTAISIIITASGTIIFQIFNFSSKFAHLIFLSYASVGSVI HHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCHH TGDIAYMYRNVNITPYNGIIVMLATTIISYTIAHIVFKNKEILI HHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIFLLIKNELIKILKRTKTWIVFGLFLVFMGVCIFGLYYEDKNMQKYNSPQYKIEQIQKS CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHH INYTEEEMSKIENSKDTEYLNTLKDDLKHYEEEKIKYENQIKNQDNVEQWKVEITEEIKG HCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC HEENLKNKNITEDDKTWISERINKLKYLEQNDIKPLYGYEFNAYNYIDTVVTILGLALLA CHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VGISVFMSDIVSGEYNPPTLKFLLVQPVSRGKVLLSKFVAVTITALTMIMSTEVLAFLGI HHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISTGFNSGTYPKTMGVRYALDSSNIATQRYPDLIRISNTGNIGTFNELIIKALLLQILF HHHCCCCCCCCCCCCCEEEEECCCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH IITCCSVVFLISTLSKNSNITTAISIIITASGTIIFQIFNFSSKFAHLIFLSYASVGSVI HHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCHH TGDIAYMYRNVNITPYNGIIVMLATTIISYTIAHIVFKNKEILI HHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA