| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933904
Identifier: 187933904
GI number: 187933904
Start: 3106749
End: 3107741
Strand: Reverse
Name: 187933904
Synonym: CLL_A3009
Alternate gene names: NA
Gene position: 3107741-3106749 (Counterclockwise)
Preceding gene: 187934905
Following gene: 187932472
Centisome position: 81.78
GC content: 22.16
Gene sequence:
>993_bases ATGAACAAAAAAAAGAAATTTTTTTATTTAAATATATTTTTTATTACTATTTTGATAGTAAGCATATGCTTTTTTAATTA TAAACTAGATCCATATGGAATTTGGAAAACTTCATTTAAATATCAAGTTTTAGAACCAAATAAAAATTATGCAAAAACAC AATTTGTATTAAATAATCCTGAAAAATATGATTCATTTATATTTGGGTCATCTAGAGTAGGACATATTGAAACAAATTTA CTGCATGACGGTAAATATTATAATATGACATATTCTGTAGGAACGCAACATGAGTGGTTAGGTACCATTAAAACTTTTAT AAATAATGATGTAAAAATAAAAAATATTATTTTAGGAATAGATGATTTTTCTTTTACGTTTGATCCCCAAAATAATAACA ACGATTTATTAAGAGTACCATATCAAAATCTTGATTATAAAGAAAAGTTTAATAAGTATCTATTAAGAAATCCAATAGAT ACTTATAATTTGAATACTATCAGAACATTAATTAATGGAAATTATTGTTTTAATAAGAATGATGATATTCTAGAAACAGG TGTCACATATGGAAATGACGATGAAATACTTAGTGATATAGAAAACCATGTTAATGATCCGAAATTTAATAATCCTGCTA ATTTTTTTGGAGTCAATAGAATTAGTGAATCCATTGATGAAATGAATGAAATTATTTCATTATGCAAAGATAATAATATA AATTTATATGTTTTTTTTAATCCAATAAATAAAATAACATATGAATCAAATAAAGAAGTAACTGAAGAATTTAAAGAACA GTTACAAAAAATAACTAGTTATTGGGATTTTTCTGGATATAATGATATAACTACTAATAATTTTTATTGGTATGAAACAT CTCATTATAGAAATATAGTAGGCAAAATGATAATGGAAAAGATGTTTAATATTGAGTTAGGAGTAGATGTACCTAATAAT TTTGGAGAATATCATTATTTATTTAAAGAGTAA
Upstream 100 bases:
>100_bases TTCAAATTGTAGTAATTATAGTTTGCGCAACTTTTGTAATATGTTCGAGCCAAACTATAACTTCACTATATTTTAATTTT TAAGGAGATTTTGATTTATT
Downstream 100 bases:
>100_bases GGCATATTGAGATACGTAATGAGAACAAAAGTTATATAGTAAATTCAAGGAATATGTTAGGACAAGCTATTTAAATTATA AAAAAATTTGATGAAGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNKKKKFFYLNIFFITILIVSICFFNYKLDPYGIWKTSFKYQVLEPNKNYAKTQFVLNNPEKYDSFIFGSSRVGHIETNL LHDGKYYNMTYSVGTQHEWLGTIKTFINNDVKIKNIILGIDDFSFTFDPQNNNNDLLRVPYQNLDYKEKFNKYLLRNPID TYNLNTIRTLINGNYCFNKNDDILETGVTYGNDDEILSDIENHVNDPKFNNPANFFGVNRISESIDEMNEIISLCKDNNI NLYVFFNPINKITYESNKEVTEEFKEQLQKITSYWDFSGYNDITTNNFYWYETSHYRNIVGKMIMEKMFNIELGVDVPNN FGEYHYLFKE
Sequences:
>Translated_330_residues MNKKKKFFYLNIFFITILIVSICFFNYKLDPYGIWKTSFKYQVLEPNKNYAKTQFVLNNPEKYDSFIFGSSRVGHIETNL LHDGKYYNMTYSVGTQHEWLGTIKTFINNDVKIKNIILGIDDFSFTFDPQNNNNDLLRVPYQNLDYKEKFNKYLLRNPID TYNLNTIRTLINGNYCFNKNDDILETGVTYGNDDEILSDIENHVNDPKFNNPANFFGVNRISESIDEMNEIISLCKDNNI NLYVFFNPINKITYESNKEVTEEFKEQLQKITSYWDFSGYNDITTNNFYWYETSHYRNIVGKMIMEKMFNIELGVDVPNN FGEYHYLFKE >Mature_330_residues MNKKKKFFYLNIFFITILIVSICFFNYKLDPYGIWKTSFKYQVLEPNKNYAKTQFVLNNPEKYDSFIFGSSRVGHIETNL LHDGKYYNMTYSVGTQHEWLGTIKTFINNDVKIKNIILGIDDFSFTFDPQNNNNDLLRVPYQNLDYKEKFNKYLLRNPID TYNLNTIRTLINGNYCFNKNDDILETGVTYGNDDEILSDIENHVNDPKFNNPANFFGVNRISESIDEMNEIISLCKDNNI NLYVFFNPINKITYESNKEVTEEFKEQLQKITSYWDFSGYNDITTNNFYWYETSHYRNIVGKMIMEKMFNIELGVDVPNN FGEYHYLFKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39253; Mature: 39253
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKKKFFYLNIFFITILIVSICFFNYKLDPYGIWKTSFKYQVLEPNKNYAKTQFVLNNP CCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCEEEEEEECCC EKYDSFIFGSSRVGHIETNLLHDGKYYNMTYSVGTQHEWLGTIKTFINNDVKIKNIILGI HHHHHEEECCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEEE DDFSFTFDPQNNNNDLLRVPYQNLDYKEKFNKYLLRNPIDTYNLNTIRTLINGNYCFNKN CCCEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCC DDILETGVTYGNDDEILSDIENHVNDPKFNNPANFFGVNRISESIDEMNEIISLCKDNNI CCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCC NLYVFFNPINKITYESNKEVTEEFKEQLQKITSYWDFSGYNDITTNNFYWYETSHYRNIV EEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHH GKMIMEKMFNIELGVDVPNNFGEYHYLFKE HHHHHHHHHCEEEECCCCCCCCCEEEEECC >Mature Secondary Structure MNKKKKFFYLNIFFITILIVSICFFNYKLDPYGIWKTSFKYQVLEPNKNYAKTQFVLNNP CCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCEEEEEEECCC EKYDSFIFGSSRVGHIETNLLHDGKYYNMTYSVGTQHEWLGTIKTFINNDVKIKNIILGI HHHHHEEECCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEEE DDFSFTFDPQNNNNDLLRVPYQNLDYKEKFNKYLLRNPIDTYNLNTIRTLINGNYCFNKN CCCEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCC DDILETGVTYGNDDEILSDIENHVNDPKFNNPANFFGVNRISESIDEMNEIISLCKDNNI CCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCC NLYVFFNPINKITYESNKEVTEEFKEQLQKITSYWDFSGYNDITTNNFYWYETSHYRNIV EEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHH GKMIMEKMFNIELGVDVPNNFGEYHYLFKE HHHHHHHHHCEEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA