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The map label for this gene is 187933891

Identifier: 187933891

GI number: 187933891

Start: 2126476

End: 2127297

Strand: Reverse

Name: 187933891

Synonym: CLL_A2032

Alternate gene names: NA

Gene position: 2127297-2126476 (Counterclockwise)

Preceding gene: 187933191

Following gene: 187935041

Centisome position: 55.98

GC content: 33.82

Gene sequence:

>822_bases
ATGAAAAGAGTAGAAATTATTAAGAAATTTAAAGAAGAAATAGCTAAAGGAAATTCTTTATTAGGAGTTGGAGCCGGTAC
AGGTATTACAGCTAAAAGTAGTGAAGCTGGTGGAGCTGATATGCTTATAATATATAATTCAGGAAAATATAGAATGGCAG
GTCGTGGATCTTTAGCAGGATTATTATCATACGGTGATGCAAATCAAATTGTTGTAGAAATGGGAGCAGAAGTATTACCA
GTTGTTAAACATACTCCAGTACTTGCAGGGGTTTGTGGTACAGATCCATTTAGATTAATGGAAGTTTATTTAAAACAACT
TAAAGAACAAGGATTTTCAGGAGTTCAAAACTTCCCAACTGTTGGTTTAATAGATGGTGTGTTTAGACAAAATCTTGAAG
AAACAGGAATGGGATATGACTTAGAAGTTGAAATGATTAGAAAAGCACATGAATTAGACATGCTTACTACTCCATATGTA
TTTGATCCAGATCAAGCAAAAGCAATGGCTGAAGCTGGTGCAGATATTTTAGTTGCTCATATGGGATTAACTACAAAAGG
AACAATTGGAGCTAAGACTGCTTTAACACTTGATGATTGTGTTGAAAAAATAGAAGCTATTATAAAAGCGGGTAGAGCTG
TTAATCCAGATATTATGGTTATTTGTCATGGAGGTCCAATTGCAGAACCTGATGATGCAGCATATGTAATTGAAAAAACA
GAAGGAATAGATGGTTTCTTTGGTGCATCAAGTATTGAAAGATTTGCGGCTGAAAGAGGTATAAAATCACAAGCAGAAGC
ATTTAAATCAATTAAAAAATAA

Upstream 100 bases:

>100_bases
AGTTTAAAGTTGCATTACTAGAAAGCAAAGATATTTATAGATAACTATTAAAATTATTAAAAATAGAATTAAAAAACAGT
AAAATTAGGAGGAATTAATC

Downstream 100 bases:

>100_bases
AGACTAATTAAGGATATGCTCCCCTTGTATAGGCACTTAAGAAAATCAAAAATGTCTATTACAAGGAGGAGTATTTTTAT
GTCTAAAAATAATTCTGTGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKRVEIIKKFKEEIAKGNSLLGVGAGTGITAKSSEAGGADMLIIYNSGKYRMAGRGSLAGLLSYGDANQIVVEMGAEVLP
VVKHTPVLAGVCGTDPFRLMEVYLKQLKEQGFSGVQNFPTVGLIDGVFRQNLEETGMGYDLEVEMIRKAHELDMLTTPYV
FDPDQAKAMAEAGADILVAHMGLTTKGTIGAKTALTLDDCVEKIEAIIKAGRAVNPDIMVICHGGPIAEPDDAAYVIEKT
EGIDGFFGASSIERFAAERGIKSQAEAFKSIKK

Sequences:

>Translated_273_residues
MKRVEIIKKFKEEIAKGNSLLGVGAGTGITAKSSEAGGADMLIIYNSGKYRMAGRGSLAGLLSYGDANQIVVEMGAEVLP
VVKHTPVLAGVCGTDPFRLMEVYLKQLKEQGFSGVQNFPTVGLIDGVFRQNLEETGMGYDLEVEMIRKAHELDMLTTPYV
FDPDQAKAMAEAGADILVAHMGLTTKGTIGAKTALTLDDCVEKIEAIIKAGRAVNPDIMVICHGGPIAEPDDAAYVIEKT
EGIDGFFGASSIERFAAERGIKSQAEAFKSIKK
>Mature_273_residues
MKRVEIIKKFKEEIAKGNSLLGVGAGTGITAKSSEAGGADMLIIYNSGKYRMAGRGSLAGLLSYGDANQIVVEMGAEVLP
VVKHTPVLAGVCGTDPFRLMEVYLKQLKEQGFSGVQNFPTVGLIDGVFRQNLEETGMGYDLEVEMIRKAHELDMLTTPYV
FDPDQAKAMAEAGADILVAHMGLTTKGTIGAKTALTLDDCVEKIEAIIKAGRAVNPDIMVICHGGPIAEPDDAAYVIEKT
EGIDGFFGASSIERFAAERGIKSQAEAFKSIKK

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 29120; Mature: 29120

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVEIIKKFKEEIAKGNSLLGVGAGTGITAKSSEAGGADMLIIYNSGKYRMAGRGSLAG
CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCHHH
LLSYGDANQIVVEMGAEVLPVVKHTPVLAGVCGTDPFRLMEVYLKQLKEQGFSGVQNFPT
HHCCCCCCHHHHHHCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCC
VGLIDGVFRQNLEETGMGYDLEVEMIRKAHELDMLTTPYVFDPDQAKAMAEAGADILVAH
HHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCEEEEE
MGLTTKGTIGAKTALTLDDCVEKIEAIIKAGRAVNPDIMVICHGGPIAEPDDAAYVIEKT
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEC
EGIDGFFGASSIERFAAERGIKSQAEAFKSIKK
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKRVEIIKKFKEEIAKGNSLLGVGAGTGITAKSSEAGGADMLIIYNSGKYRMAGRGSLAG
CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCHHH
LLSYGDANQIVVEMGAEVLPVVKHTPVLAGVCGTDPFRLMEVYLKQLKEQGFSGVQNFPT
HHCCCCCCHHHHHHCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCC
VGLIDGVFRQNLEETGMGYDLEVEMIRKAHELDMLTTPYVFDPDQAKAMAEAGADILVAH
HHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCEEEEE
MGLTTKGTIGAKTALTLDDCVEKIEAIIKAGRAVNPDIMVICHGGPIAEPDDAAYVIEKT
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEC
EGIDGFFGASSIERFAAERGIKSQAEAFKSIKK
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]