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The map label for this gene is scpA [H]

Identifier: 187933873

GI number: 187933873

Start: 2457177

End: 2457932

Strand: Reverse

Name: scpA [H]

Synonym: CLL_A2366

Alternate gene names: 187933873

Gene position: 2457932-2457177 (Counterclockwise)

Preceding gene: 187932841

Following gene: 187932772

Centisome position: 64.68

GC content: 22.88

Gene sequence:

>756_bases
ATGGATTTTCCAAGTATTAAGATAAAAGATTTTGAAGGTCCATTTGATTTATTACTTCATTTAATTAAGAAAAATCAAAT
GGATATCTATAATGTAGAAATATCAAAAATAACAAATCAATATTTAAAGTATATTGATGATATGAAGTTTATGGATTTAG
AAATAACATCTGAATTTATAGTAGTTGCAGCTACATTAATAGAAATAAAATCTAAACATTTATTGCCTAAAATTAAGAAA
GATGAAGATGAGGATGAAGAAGATCAAGAAAAAAATCTTATTGAAAAACTTATTTTGTATAAGAAAATAAAGAGGGTAGC
TGAATTTTTTAAAGATAGATACGTTAATTCAGGTGAATTATATACTAAAAAGCCAGAAATAATAGAAGAAATTAATTTGC
CAAATAATAATGAAGATATATTTAAAAATTTAACGCTTTTAGAATTATACAATATGTATAATAACCTTTTGGAGATATAT
AACAATAAACAAAATAAAGCTAATGTAATTCAAAAAAGAATATATGTTGATAAATATAAAATTGAGGACAAGCTTGAATA
TCTTTTAGGGCTTATAGAAAACAATGAAGTAAGTAAATTTTCGGAAATTATTGATAAATGTGAATGTAAATTAGAATGCA
TTGTTAGTTTTTTAGCTTTACTTGAAATGGTAAAGCTAAAAAAAGTGAGAGTATACCAAAGTGATAGTTTTGATAATATA
TTAATTGAAAGGAGACAAGATGAAGGAGAAGAGTGA

Upstream 100 bases:

>100_bases
TCTTATAAAGGTAACAAGCTTGTTAAAAATATATTTAATTGATATTATTTAAAGAAGATAGTAAAATACTAATATCCATG
CTAAAAAGGTGAGTGAATAT

Downstream 100 bases:

>100_bases
TAAACTACAAATTCAGTTCTTAGAAGAATTTCAAAAAAGATCTTTAAAATCAGGGATTGAAGCATTACTTTTTGCAAGTG
GAGAGCCACTAACAGCAAAA

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDFPSIKIKDFEGPFDLLLHLIKKNQMDIYNVEISKITNQYLKYIDDMKFMDLEITSEFIVVAATLIEIKSKHLLPKIKK
DEDEDEEDQEKNLIEKLILYKKIKRVAEFFKDRYVNSGELYTKKPEIIEEINLPNNNEDIFKNLTLLELYNMYNNLLEIY
NNKQNKANVIQKRIYVDKYKIEDKLEYLLGLIENNEVSKFSEIIDKCECKLECIVSFLALLEMVKLKKVRVYQSDSFDNI
LIERRQDEGEE

Sequences:

>Translated_251_residues
MDFPSIKIKDFEGPFDLLLHLIKKNQMDIYNVEISKITNQYLKYIDDMKFMDLEITSEFIVVAATLIEIKSKHLLPKIKK
DEDEDEEDQEKNLIEKLILYKKIKRVAEFFKDRYVNSGELYTKKPEIIEEINLPNNNEDIFKNLTLLELYNMYNNLLEIY
NNKQNKANVIQKRIYVDKYKIEDKLEYLLGLIENNEVSKFSEIIDKCECKLECIVSFLALLEMVKLKKVRVYQSDSFDNI
LIERRQDEGEE
>Mature_251_residues
MDFPSIKIKDFEGPFDLLLHLIKKNQMDIYNVEISKITNQYLKYIDDMKFMDLEITSEFIVVAATLIEIKSKHLLPKIKK
DEDEDEEDQEKNLIEKLILYKKIKRVAEFFKDRYVNSGELYTKKPEIIEEINLPNNNEDIFKNLTLLELYNMYNNLLEIY
NNKQNKANVIQKRIYVDKYKIEDKLEYLLGLIENNEVSKFSEIIDKCECKLECIVSFLALLEMVKLKKVRVYQSDSFDNI
LIERRQDEGEE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29976; Mature: 29976

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFPSIKIKDFEGPFDLLLHLIKKNQMDIYNVEISKITNQYLKYIDDMKFMDLEITSEFI
CCCCCCEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCHHEEHHHHHHHH
VVAATLIEIKSKHLLPKIKKDEDEDEEDQEKNLIEKLILYKKIKRVAEFFKDRYVNSGEL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YTKKPEIIEEINLPNNNEDIFKNLTLLELYNMYNNLLEIYNNKQNKANVIQKRIYVDKYK
EECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IEDKLEYLLGLIENNEVSKFSEIIDKCECKLECIVSFLALLEMVKLKKVRVYQSDSFDNI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LIERRQDEGEE
HHHCCCCCCCC
>Mature Secondary Structure
MDFPSIKIKDFEGPFDLLLHLIKKNQMDIYNVEISKITNQYLKYIDDMKFMDLEITSEFI
CCCCCCEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCHHEEHHHHHHHH
VVAATLIEIKSKHLLPKIKKDEDEDEEDQEKNLIEKLILYKKIKRVAEFFKDRYVNSGEL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YTKKPEIIEEINLPNNNEDIFKNLTLLELYNMYNNLLEIYNNKQNKANVIQKRIYVDKYK
EECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IEDKLEYLLGLIENNEVSKFSEIIDKCECKLECIVSFLALLEMVKLKKVRVYQSDSFDNI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LIERRQDEGEE
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA