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The map label for this gene is 187933839

Identifier: 187933839

GI number: 187933839

Start: 2538944

End: 2540182

Strand: Reverse

Name: 187933839

Synonym: CLL_A2455

Alternate gene names: NA

Gene position: 2540182-2538944 (Counterclockwise)

Preceding gene: 187933761

Following gene: 187935273

Centisome position: 66.84

GC content: 23.89

Gene sequence:

>1239_bases
ATGAAAGAAGTATTAAATAAAATTTACAATTTTGTAGATAACAGATTGTATTTTAGATTACTATATATATTAGTCAGCTT
AGGATTTGCAACTATTTTTTTATATGTCCCGGCAATAAAGAAATTAAATACTGTTGTTTTAGCTTGGGGTATTTTACTAA
TATTAATTATGATGTTTAAGGACTATAAAACAAGAAAGATATACAAGTTTGATGTTCCAATAATTTTATTTATAATTTTT
ACTTTAGCACTTAACATATTTGCTTATAGGACTACGGAAAACATTAAAATATGGATAGTTAATTTAATGATATTTACATC
GTTATATACAATAGATGTATTTAAAAGTAAAAGACAAAATATAAAAGAAATGAAGATTATATCATATTTTTATATTGTTT
TAATGTTACCATTGTCAATAGTTTCATTATATGTAGACTATAAGAAGATAACTATACAAGCAACTGATATGGTATTTGGA
ACAGGCCGATCATTTGGGATTTTTGTAAATCAAAATGCTTTATCTATAGCGGCTGGGTTAGCAGTTGTATTAAGTATATA
TTTAATGCAAAGAAATAATAATATTAAGATGAAAACATTACTGTTTTTAAACTTTATTATACAGGGTATTACAATGGTAA
AAGCAAATGGAAGAAGTTCATATTTGCTTATAATTGCTGTAATATATTTATTTTTATTCATATATTTAAAAAACAAATAT
TTAAGAATAGCATTACTGATAATTCCATTTTTATGTTCAAGTATATTATTAACTTTTAATGAAGATAGGTTACATGGATT
TACAAGTGGAAGAAATATTTTATGGAAATCAGCTAGTTTTGTTATAAAAGACAATCCTATGATTGGAGTAGGAAATTCAG
ATTTATTAGAAGCAGTAAGAAATGCTAGAGTAGTTGAATATTTACCAGGAATAGAATATGGTGGTCTTCATAATGTTTAT
CTTCAAATAGCAGCTACAAATGGAATTATTTCATTAGTATTGATGTTGGTATTTTTAATAAGCATCATGGTATTTATAAT
AAAAAAATTAGACAAACTCAAGGGAAAAGAAAAACTTCAAATGACTACAATAGCATCTATGCTACTTGGAATATTAGCAG
TAAATGTATTTGAAAGTAATTTGGTTTATATAATAAGTTTTATATCCATTATGTTTTGGATATATCTTGGGTATACAATA
TCTATATTAGATAATAGAAATATAAGCAATAATAACTAG

Upstream 100 bases:

>100_bases
TATAAAAATTATGATGAAAACAATATTAGAAATATAACAATTAAAAATTATTCTGAAGATTTGTTAGTAGAGAATTTGAA
GGGAGTGTATAAAAGAGTAA

Downstream 100 bases:

>100_bases
GGGGATTTTAAAATGGAATTTTATAAACAAACAATAAAAGAATTTATTGGGGATGTAGAAAGTGATAAGGCATCACCAGG
TGGTGGAAGTGTAGCAGGAT

Product: O-antigen polymerase family

Products: NA

Alternate protein names: O-Antigen Polymerase Family

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKEVLNKIYNFVDNRLYFRLLYILVSLGFATIFLYVPAIKKLNTVVLAWGILLILIMMFKDYKTRKIYKFDVPIILFIIF
TLALNIFAYRTTENIKIWIVNLMIFTSLYTIDVFKSKRQNIKEMKIISYFYIVLMLPLSIVSLYVDYKKITIQATDMVFG
TGRSFGIFVNQNALSIAAGLAVVLSIYLMQRNNNIKMKTLLFLNFIIQGITMVKANGRSSYLLIIAVIYLFLFIYLKNKY
LRIALLIIPFLCSSILLTFNEDRLHGFTSGRNILWKSASFVIKDNPMIGVGNSDLLEAVRNARVVEYLPGIEYGGLHNVY
LQIAATNGIISLVLMLVFLISIMVFIIKKLDKLKGKEKLQMTTIASMLLGILAVNVFESNLVYIISFISIMFWIYLGYTI
SILDNRNISNNN

Sequences:

>Translated_412_residues
MKEVLNKIYNFVDNRLYFRLLYILVSLGFATIFLYVPAIKKLNTVVLAWGILLILIMMFKDYKTRKIYKFDVPIILFIIF
TLALNIFAYRTTENIKIWIVNLMIFTSLYTIDVFKSKRQNIKEMKIISYFYIVLMLPLSIVSLYVDYKKITIQATDMVFG
TGRSFGIFVNQNALSIAAGLAVVLSIYLMQRNNNIKMKTLLFLNFIIQGITMVKANGRSSYLLIIAVIYLFLFIYLKNKY
LRIALLIIPFLCSSILLTFNEDRLHGFTSGRNILWKSASFVIKDNPMIGVGNSDLLEAVRNARVVEYLPGIEYGGLHNVY
LQIAATNGIISLVLMLVFLISIMVFIIKKLDKLKGKEKLQMTTIASMLLGILAVNVFESNLVYIISFISIMFWIYLGYTI
SILDNRNISNNN
>Mature_412_residues
MKEVLNKIYNFVDNRLYFRLLYILVSLGFATIFLYVPAIKKLNTVVLAWGILLILIMMFKDYKTRKIYKFDVPIILFIIF
TLALNIFAYRTTENIKIWIVNLMIFTSLYTIDVFKSKRQNIKEMKIISYFYIVLMLPLSIVSLYVDYKKITIQATDMVFG
TGRSFGIFVNQNALSIAAGLAVVLSIYLMQRNNNIKMKTLLFLNFIIQGITMVKANGRSSYLLIIAVIYLFLFIYLKNKY
LRIALLIIPFLCSSILLTFNEDRLHGFTSGRNILWKSASFVIKDNPMIGVGNSDLLEAVRNARVVEYLPGIEYGGLHNVY
LQIAATNGIISLVLMLVFLISIMVFIIKKLDKLKGKEKLQMTTIASMLLGILAVNVFESNLVYIISFISIMFWIYLGYTI
SILDNRNISNNN

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47377; Mature: 47377

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVLNKIYNFVDNRLYFRLLYILVSLGFATIFLYVPAIKKLNTVVLAWGILLILIMMFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DYKTRKIYKFDVPIILFIIFTLALNIFAYRTTENIKIWIVNLMIFTSLYTIDVFKSKRQN
CCCCCEEEEECHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCC
IKEMKIISYFYIVLMLPLSIVSLYVDYKKITIQATDMVFGTGRSFGIFVNQNALSIAAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCEEEEEEECCHHHHHHHH
AVVLSIYLMQRNNNIKMKTLLFLNFIIQGITMVKANGRSSYLLIIAVIYLFLFIYLKNKY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCH
LRIALLIIPFLCSSILLTFNEDRLHGFTSGRNILWKSASFVIKDNPMIGVGNSDLLEAVR
HHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEECCEEEEECCCEEECCCHHHHHHHH
NARVVEYLPGIEYGGLHNVYLQIAATNGIISLVLMLVFLISIMVFIIKKLDKLKGKEKLQ
CCCHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MTTIASMLLGILAVNVFESNLVYIISFISIMFWIYLGYTISILDNRNISNNN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC
>Mature Secondary Structure
MKEVLNKIYNFVDNRLYFRLLYILVSLGFATIFLYVPAIKKLNTVVLAWGILLILIMMFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DYKTRKIYKFDVPIILFIIFTLALNIFAYRTTENIKIWIVNLMIFTSLYTIDVFKSKRQN
CCCCCEEEEECHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCC
IKEMKIISYFYIVLMLPLSIVSLYVDYKKITIQATDMVFGTGRSFGIFVNQNALSIAAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCEEEEEEECCHHHHHHHH
AVVLSIYLMQRNNNIKMKTLLFLNFIIQGITMVKANGRSSYLLIIAVIYLFLFIYLKNKY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCH
LRIALLIIPFLCSSILLTFNEDRLHGFTSGRNILWKSASFVIKDNPMIGVGNSDLLEAVR
HHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEECCEEEEECCCEEECCCHHHHHHHH
NARVVEYLPGIEYGGLHNVYLQIAATNGIISLVLMLVFLISIMVFIIKKLDKLKGKEKLQ
CCCHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MTTIASMLLGILAVNVFESNLVYIISFISIMFWIYLGYTISILDNRNISNNN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA