| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933670
Identifier: 187933670
GI number: 187933670
Start: 451677
End: 452294
Strand: Reverse
Name: 187933670
Synonym: CLL_A0453
Alternate gene names: NA
Gene position: 452294-451677 (Counterclockwise)
Preceding gene: 187933222
Following gene: 187934743
Centisome position: 11.9
GC content: 25.57
Gene sequence:
>618_bases ATGACAATCTATGCTAAAGTAATTGTTAATGGTTCACCAATAACAAAATCAAATTTTAAACTACATAATACTAATGGACG TGCTATTTTACCTAGTAATTCTGGAAAATATCATGATAGATATGCTATCTATGAACAAGAAATTGCTCTTATTGCTCGAA GTCAAAATCCCGATGTTATATTAGAAGAAAGTTTAATAGCTATACTGAAAGTTTATTATAAAAGTGAAAAACGCCATCCT GATACAATAAATATAACAAAAAGTATATTTGATGGAATAGAAAAAAGTGGTCTTATAATAAATGATGCTCAAATTACTAG AATAATCGTCGAGGAATATTATGATAAGGGAAACCCACGCTTTGAATTAGAACTATTTGCTGAAAGTGAATATGAGGTTA ATTATTCTATAAATAAAAAATCAGTTTTAGGTAACCCTAAATTATATTCTCCAATAAGAAAAAACGTATTAAATCCAAAT ACTAACAAGAACAAAGCTATAGAAATTAATAAAAATCTTTGTACAATTTGTAATACTATACTCAAAACAAATGATTACAT AAAAGCAGATGGTGGTAAAACACTGATATGTAAAAAATGTTTTAATAAATTATTTTAA
Upstream 100 bases:
>100_bases ATCAATTTTTCATTATTGTATAAGTTACTATTATACTATATATTTTTATATAGTATAATTATATTTTAATGAAGTTTATA TTAAATATTAAGGAGTTTTT
Downstream 100 bases:
>100_bases AGGTGGGTTTGTTTGATGAATAAACATATAGATATAATATTTTTAGGTGATAGTTTAACTTTTGGATATGGTGTTCCTAA AAAGGATTCTTGGGTTTATA
Product: endodeoxyribonuclease, RusA family protein
Products: NA
Alternate protein names: Endodeoxyribonuclease RusA Family Protein; Endodeoxyribonuclease; Endonuclease; Zn-Finger Containing Protein; Crossover Junction Endodeoxyribonuclease RusA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTIYAKVIVNGSPITKSNFKLHNTNGRAILPSNSGKYHDRYAIYEQEIALIARSQNPDVILEESLIAILKVYYKSEKRHP DTINITKSIFDGIEKSGLIINDAQITRIIVEEYYDKGNPRFELELFAESEYEVNYSINKKSVLGNPKLYSPIRKNVLNPN TNKNKAIEINKNLCTICNTILKTNDYIKADGGKTLICKKCFNKLF
Sequences:
>Translated_205_residues MTIYAKVIVNGSPITKSNFKLHNTNGRAILPSNSGKYHDRYAIYEQEIALIARSQNPDVILEESLIAILKVYYKSEKRHP DTINITKSIFDGIEKSGLIINDAQITRIIVEEYYDKGNPRFELELFAESEYEVNYSINKKSVLGNPKLYSPIRKNVLNPN TNKNKAIEINKNLCTICNTILKTNDYIKADGGKTLICKKCFNKLF >Mature_204_residues TIYAKVIVNGSPITKSNFKLHNTNGRAILPSNSGKYHDRYAIYEQEIALIARSQNPDVILEESLIAILKVYYKSEKRHPD TINITKSIFDGIEKSGLIINDAQITRIIVEEYYDKGNPRFELELFAESEYEVNYSINKKSVLGNPKLYSPIRKNVLNPNT NKNKAIEINKNLCTICNTILKTNDYIKADGGKTLICKKCFNKLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23383; Mature: 23252
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYAKVIVNGSPITKSNFKLHNTNGRAILPSNSGKYHDRYAIYEQEIALIARSQNPDVI CEEEEEEEECCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEHHHHEEEEEEECCCCCEE LEESLIAILKVYYKSEKRHPDTINITKSIFDGIEKSGLIINDAQITRIIVEEYYDKGNPR EHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCHHHCCEEEECHHHHHHHHHHHHHCCCCE FELELFAESEYEVNYSINKKSVLGNPKLYSPIRKNVLNPNTNKNKAIEINKNLCTICNTI EEEEEEECCCEEEEEEECCCEECCCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHH LKTNDYIKADGGKTLICKKCFNKLF HHCCCEEEECCCCEEEHHHHHHHCC >Mature Secondary Structure TIYAKVIVNGSPITKSNFKLHNTNGRAILPSNSGKYHDRYAIYEQEIALIARSQNPDVI EEEEEEEECCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEHHHHEEEEEEECCCCCEE LEESLIAILKVYYKSEKRHPDTINITKSIFDGIEKSGLIINDAQITRIIVEEYYDKGNPR EHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCHHHCCEEEECHHHHHHHHHHHHHCCCCE FELELFAESEYEVNYSINKKSVLGNPKLYSPIRKNVLNPNTNKNKAIEINKNLCTICNTI EEEEEEECCCEEEEEEECCCEECCCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHH LKTNDYIKADGGKTLICKKCFNKLF HHCCCEEEECCCCEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA