| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933462
Identifier: 187933462
GI number: 187933462
Start: 2866073
End: 2866816
Strand: Reverse
Name: 187933462
Synonym: CLL_A2779
Alternate gene names: NA
Gene position: 2866816-2866073 (Counterclockwise)
Preceding gene: 187932800
Following gene: 187935629
Centisome position: 75.44
GC content: 32.66
Gene sequence:
>744_bases ATGAATGAAAATAAAGAATTAACAGAACAACAAGGGGCAAACATTGCAAATGATTTAGATACATTCGGCAGCATAAAAGG TTTTGAAAATACTTGCAGAATGGCTAAAGCACTTGCAAGCAGCACAATAGTACCAAAAGAATATCATGATAATATAGGAA ATTGTCTTATTGCATTAGATGTTGCTAATAGAGTTGGATTAAGTCCTATTATGGTAATGCAAAATTTATATGTAGTAAAC GGGAGACCTGCTTGGGGTTCTCAAAGCATAAGTGCCCTAATAAATACATCTAAAAAATATGCTAAACCACTTCAATATAA GATAGATGGTTCTGGAGATGAATTAAGCTGTTATGCATATACGTTTGACCATGAGGAAAATGAAATTAAAGGTCCAGTTA TAACTATAAAAATGGCAAAAGAGGAAGGATGGATAAACAAGAGCGGTTCTAAATGGAAGACTATGCCTGAGGTAATGATT AGGTATAGGGCAGCTAGTTTCTTTGGAAGATTGCATTGCTCAGAATTATTGTTAGGAATATATTCAGCCGATGAAGCTGT AGAATTAGAACCTGCAACAGTAATTGAGGTTACACATGAAGAAGTAAAGCAAGAAATTAAAGAAAATGCTAATCAAGAAA TAATTGATATTCAAATTGAAGAAGTCAAAGAAGACGATAAAGAAAAATCTAAAAATGAAAATCCTACAGTAAAACAAACT GTAGTGAAAACAGAGCCATTCTAA
Upstream 100 bases:
>100_bases ATAATGCTGAAGCAGTAAATCAAATAGGTTTTACAGACAGTCAGTTAATCAAGCTGGTTGTTAGCTTAGATAAAAATTTA AAAGTGGAGGTAGACAAGTA
Downstream 100 bases:
>100_bases TGATAAAAGTTATTGCTACAGGCTCAACAGGAAATTCATATATCATTCAAGCTGGAGAAGAAATTCTCTTGCTTGAACTA GGGATTAACTTCAAGAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MNENKELTEQQGANIANDLDTFGSIKGFENTCRMAKALASSTIVPKEYHDNIGNCLIALDVANRVGLSPIMVMQNLYVVN GRPAWGSQSISALINTSKKYAKPLQYKIDGSGDELSCYAYTFDHEENEIKGPVITIKMAKEEGWINKSGSKWKTMPEVMI RYRAASFFGRLHCSELLLGIYSADEAVELEPATVIEVTHEEVKQEIKENANQEIIDIQIEEVKEDDKEKSKNENPTVKQT VVKTEPF
Sequences:
>Translated_247_residues MNENKELTEQQGANIANDLDTFGSIKGFENTCRMAKALASSTIVPKEYHDNIGNCLIALDVANRVGLSPIMVMQNLYVVN GRPAWGSQSISALINTSKKYAKPLQYKIDGSGDELSCYAYTFDHEENEIKGPVITIKMAKEEGWINKSGSKWKTMPEVMI RYRAASFFGRLHCSELLLGIYSADEAVELEPATVIEVTHEEVKQEIKENANQEIIDIQIEEVKEDDKEKSKNENPTVKQT VVKTEPF >Mature_247_residues MNENKELTEQQGANIANDLDTFGSIKGFENTCRMAKALASSTIVPKEYHDNIGNCLIALDVANRVGLSPIMVMQNLYVVN GRPAWGSQSISALINTSKKYAKPLQYKIDGSGDELSCYAYTFDHEENEIKGPVITIKMAKEEGWINKSGSKWKTMPEVMI RYRAASFFGRLHCSELLLGIYSADEAVELEPATVIEVTHEEVKQEIKENANQEIIDIQIEEVKEDDKEKSKNENPTVKQT VVKTEPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27696; Mature: 27696
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENKELTEQQGANIANDLDTFGSIKGFENTCRMAKALASSTIVPKEYHDNIGNCLIALD CCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEE VANRVGLSPIMVMQNLYVVNGRPAWGSQSISALINTSKKYAKPLQYKIDGSGDELSCYAY CHHHCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHCCHHHCCCCEEEECCCCCEEEEEEE TFDHEENEIKGPVITIKMAKEEGWINKSGSKWKTMPEVMIRYRAASFFGRLHCSELLLGI EEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSADEAVELEPATVIEVTHEEVKQEIKENANQEIIDIQIEEVKEDDKEKSKNENPTVKQT HCCCCCEECCCCEEEEECHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHE VVKTEPF EEECCCC >Mature Secondary Structure MNENKELTEQQGANIANDLDTFGSIKGFENTCRMAKALASSTIVPKEYHDNIGNCLIALD CCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEE VANRVGLSPIMVMQNLYVVNGRPAWGSQSISALINTSKKYAKPLQYKIDGSGDELSCYAY CHHHCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHCCHHHCCCCEEEECCCCCEEEEEEE TFDHEENEIKGPVITIKMAKEEGWINKSGSKWKTMPEVMIRYRAASFFGRLHCSELLLGI EEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSADEAVELEPATVIEVTHEEVKQEIKENANQEIIDIQIEEVKEDDKEKSKNENPTVKQT HCCCCCEECCCCEEEEECHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHE VVKTEPF EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA