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The map label for this gene is spoVB [H]

Identifier: 187933364

GI number: 187933364

Start: 2949766

End: 2951373

Strand: Reverse

Name: spoVB [H]

Synonym: CLL_A2872

Alternate gene names: 187933364

Gene position: 2951373-2949766 (Counterclockwise)

Preceding gene: 187934776

Following gene: 187935365

Centisome position: 77.66

GC content: 31.47

Gene sequence:

>1608_bases
ATGAAGGGAGAATCATCTACTAAAGGCTTTGTAATTCTTTCAGCAGCAGGACTTTTAGCTAAACTGATGTCTGTATTTTA
TGTTCCGTTATTAAGGAGAACGATAGGCCTTGAAGGCCTTGGAATATATCAAATGTGTTATGAAGTATTTATTTTTGCAT
ATGCAGTAACTACTTTAGGAGCTCAGCCAGCAATTGCAAAAGTTGTAGCTGAGCTTACAGCTACGAAAAATAAAAGAGAT
GCAATTAAGGCGCTAAAGATATCTACAATACTTTATGCAGGGGTTGGAGGAGTAATAAGTATACTTATTATGATATTATC
TACTCCAATAGCAAATGCAATAGGAACACCAGAGGCGGCATATGGTTTATTATTTTTAGCTCCAAGTATTTTTGTGACTT
CTATATTATCAGCATATAGAGGATATTTTCAAGGTAAAAATAATATGACAGCAATTGCTGTATCTCAAGTCTTAGAACAA
ATAATAAATGTTGGTGTGAGTTTAGCTTTTGCTTATGTTCTAGTAAAAATAAGCATTCCTTATGGTAGTGCAGGTGGAAC
AGTAGGTACTACATTAGGTGCAATAATAGCATGTCTTTATATGGTGTATGTATATTATAAGAAAAATTATGAGGGTGAAG
TCTTTGATGCAGAGTTACCTGTTAAAAGGGTAAGCAATAAGAGAATAGTTAGGAAATTAGTCAAATATGGAGTACCAATC
ACATTAAGTGCTGGATTACAGAACTTAGGGAGCTTAATTGATATGGTAAATGTAAAGAATAGATTAGCTTATGCTGGTTT
TTTAGAAAAACAAGCTAATGAACTTTACGGAATACTTGGAACTTATAAAACATTACTTTCTGTTCCATTGGTAATAGTTA
CAGCACTAGCTACGACAGTATTACCTGCAATTGTAAGTGCAGTAGCTATAAAAGATAAAAAGGAAATTAGAAGAAAAGTA
AATTTTGCATTTAGAATAACTTATGCAGTAACAATACCTGCTGCTGTGGGACTTGCGGTTTTAAGTAAAGAAATTTATTT
ATTGTTATATGGTTCAGTGCAGGGCTACGAGTTAATGATATATGGTTCTGTGGTTGTAATACTAATGGCCGTTGTACAAA
TTCAAAATGTTATATTGCAAAGTATGAATAAACTTTACTTTGTTTTAGGTACATTTATGATAGGTATAGTAGCTAAGATA
GCTACTAATTACATATTGGTTGGAATGCCAGAGATTAATGTATTAGGTGCGGTTTTTGGTAACTTTTTATGGTTTGTAAT
ACCTTTTTTATTAAATCAAAGAAAACTTAGTAAAACATTAAAAATGAAATTGCCACTATTCAAGCATACTTTGAAACCTA
TTCTTTCTTCTGTAGGAATGGTTGCAGGTATATACTTGATTAAAGAACCCTTTGGAGTATTACTTATATTATTAAATGCT
GGAGGAGTGTTACAAGGATTAGTAACAATGCTTATGATTTCAGTAGGTGGATTTGTATACTTGTACTTAATGATAATACT
AGGTGGTATTAGAAAAAATGATATTACATCATTCTCTCAAAAGGCATATAATATATTACCAAGATTTTTAAGGGTTAAAT
TAAAATAA

Upstream 100 bases:

>100_bases
AGAGTACTTAACAAATAAAACCGTAGTTAATGCTTTACCTCCGATATTAAAGAAGATAAAGAGTGATGTATTTAAATTTT
CACTTAGATAGGGGTTTAAT

Downstream 100 bases:

>100_bases
TTTTAGTACGTTTGAACAGAATGCTGATATATGCATAAGTAAAGATGGACAAAATTAAAATATAAAATAATTAAAGAAAA
AGTTCATGCTTCTAAATGTA

Product: stage V sporulation protein B

Products: NA

Alternate protein names: Stage III sporulation protein F [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MKGESSTKGFVILSAAGLLAKLMSVFYVPLLRRTIGLEGLGIYQMCYEVFIFAYAVTTLGAQPAIAKVVAELTATKNKRD
AIKALKISTILYAGVGGVISILIMILSTPIANAIGTPEAAYGLLFLAPSIFVTSILSAYRGYFQGKNNMTAIAVSQVLEQ
IINVGVSLAFAYVLVKISIPYGSAGGTVGTTLGAIIACLYMVYVYYKKNYEGEVFDAELPVKRVSNKRIVRKLVKYGVPI
TLSAGLQNLGSLIDMVNVKNRLAYAGFLEKQANELYGILGTYKTLLSVPLVIVTALATTVLPAIVSAVAIKDKKEIRRKV
NFAFRITYAVTIPAAVGLAVLSKEIYLLLYGSVQGYELMIYGSVVVILMAVVQIQNVILQSMNKLYFVLGTFMIGIVAKI
ATNYILVGMPEINVLGAVFGNFLWFVIPFLLNQRKLSKTLKMKLPLFKHTLKPILSSVGMVAGIYLIKEPFGVLLILLNA
GGVLQGLVTMLMISVGGFVYLYLMIILGGIRKNDITSFSQKAYNILPRFLRVKLK

Sequences:

>Translated_535_residues
MKGESSTKGFVILSAAGLLAKLMSVFYVPLLRRTIGLEGLGIYQMCYEVFIFAYAVTTLGAQPAIAKVVAELTATKNKRD
AIKALKISTILYAGVGGVISILIMILSTPIANAIGTPEAAYGLLFLAPSIFVTSILSAYRGYFQGKNNMTAIAVSQVLEQ
IINVGVSLAFAYVLVKISIPYGSAGGTVGTTLGAIIACLYMVYVYYKKNYEGEVFDAELPVKRVSNKRIVRKLVKYGVPI
TLSAGLQNLGSLIDMVNVKNRLAYAGFLEKQANELYGILGTYKTLLSVPLVIVTALATTVLPAIVSAVAIKDKKEIRRKV
NFAFRITYAVTIPAAVGLAVLSKEIYLLLYGSVQGYELMIYGSVVVILMAVVQIQNVILQSMNKLYFVLGTFMIGIVAKI
ATNYILVGMPEINVLGAVFGNFLWFVIPFLLNQRKLSKTLKMKLPLFKHTLKPILSSVGMVAGIYLIKEPFGVLLILLNA
GGVLQGLVTMLMISVGGFVYLYLMIILGGIRKNDITSFSQKAYNILPRFLRVKLK
>Mature_535_residues
MKGESSTKGFVILSAAGLLAKLMSVFYVPLLRRTIGLEGLGIYQMCYEVFIFAYAVTTLGAQPAIAKVVAELTATKNKRD
AIKALKISTILYAGVGGVISILIMILSTPIANAIGTPEAAYGLLFLAPSIFVTSILSAYRGYFQGKNNMTAIAVSQVLEQ
IINVGVSLAFAYVLVKISIPYGSAGGTVGTTLGAIIACLYMVYVYYKKNYEGEVFDAELPVKRVSNKRIVRKLVKYGVPI
TLSAGLQNLGSLIDMVNVKNRLAYAGFLEKQANELYGILGTYKTLLSVPLVIVTALATTVLPAIVSAVAIKDKKEIRRKV
NFAFRITYAVTIPAAVGLAVLSKEIYLLLYGSVQGYELMIYGSVVVILMAVVQIQNVILQSMNKLYFVLGTFMIGIVAKI
ATNYILVGMPEINVLGAVFGNFLWFVIPFLLNQRKLSKTLKMKLPLFKHTLKPILSSVGMVAGIYLIKEPFGVLLILLNA
GGVLQGLVTMLMISVGGFVYLYLMIILGGIRKNDITSFSQKAYNILPRFLRVKLK

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 58140; Mature: 58140

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGESSTKGFVILSAAGLLAKLMSVFYVPLLRRTIGLEGLGIYQMCYEVFIFAYAVTTLG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
AQPAIAKVVAELTATKNKRDAIKALKISTILYAGVGGVISILIMILSTPIANAIGTPEAA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YGLLFLAPSIFVTSILSAYRGYFQGKNNMTAIAVSQVLEQIINVGVSLAFAYVLVKISIP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
YGSAGGTVGTTLGAIIACLYMVYVYYKKNYEGEVFDAELPVKRVSNKRIVRKLVKYGVPI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHCCHHHHHHHHHCCCCE
TLSAGLQNLGSLIDMVNVKNRLAYAGFLEKQANELYGILGTYKTLLSVPLVIVTALATTV
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPAIVSAVAIKDKKEIRRKVNFAFRITYAVTIPAAVGLAVLSKEIYLLLYGSVQGYELMI
HHHHHHHHHHCCHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHHHHEEEEECCCCEEEEE
YGSVVVILMAVVQIQNVILQSMNKLYFVLGTFMIGIVAKIATNYILVGMPEINVLGAVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHH
NFLWFVIPFLLNQRKLSKTLKMKLPLFKHTLKPILSSVGMVAGIYLIKEPFGVLLILLNA
HHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
GGVLQGLVTMLMISVGGFVYLYLMIILGGIRKNDITSFSQKAYNILPRFLRVKLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGESSTKGFVILSAAGLLAKLMSVFYVPLLRRTIGLEGLGIYQMCYEVFIFAYAVTTLG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
AQPAIAKVVAELTATKNKRDAIKALKISTILYAGVGGVISILIMILSTPIANAIGTPEAA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YGLLFLAPSIFVTSILSAYRGYFQGKNNMTAIAVSQVLEQIINVGVSLAFAYVLVKISIP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
YGSAGGTVGTTLGAIIACLYMVYVYYKKNYEGEVFDAELPVKRVSNKRIVRKLVKYGVPI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHCCHHHHHHHHHCCCCE
TLSAGLQNLGSLIDMVNVKNRLAYAGFLEKQANELYGILGTYKTLLSVPLVIVTALATTV
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPAIVSAVAIKDKKEIRRKVNFAFRITYAVTIPAAVGLAVLSKEIYLLLYGSVQGYELMI
HHHHHHHHHHCCHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHHHHEEEEECCCCEEEEE
YGSVVVILMAVVQIQNVILQSMNKLYFVLGTFMIGIVAKIATNYILVGMPEINVLGAVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHH
NFLWFVIPFLLNQRKLSKTLKMKLPLFKHTLKPILSSVGMVAGIYLIKEPFGVLLILLNA
HHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
GGVLQGLVTMLMISVGGFVYLYLMIILGGIRKNDITSFSQKAYNILPRFLRVKLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377 [H]