| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933354
Identifier: 187933354
GI number: 187933354
Start: 2554857
End: 2556452
Strand: Reverse
Name: 187933354
Synonym: CLL_A2465
Alternate gene names: NA
Gene position: 2556452-2554857 (Counterclockwise)
Preceding gene: 187933975
Following gene: 187932705
Centisome position: 67.27
GC content: 22.81
Gene sequence:
>1596_bases ATGATTAAGGTAACAGTTAATATAAATGGTATGGATTACAACTTAAAAGGTGATAAAAATGAACAATACTTAGTTGATTT AGCTGATTTTGTTGATAGTAAAGTAAAAGAGATAATGAGTAAAAACTCTAGATTAAGCACTAGTGCCGCAACGGTACTTG CAGCAGTAAATATAGCAGATGAACTTTACGAATGTGATTTTAATTTAAGAAATGCCATTAATAAGAAGAAAAATATAGAA ACTGAAAAAAGTGAATTAATTCAAAAAGTAGACAAGTTAAATGAGGATTTAAAAACAACACTAGTAGAGAAAACAAAGAT TCAAGAACAATTAGTAAATGGAGAGCAATCTTTAAAAGAAAAATATGCAGAGATAGAACAACAACTTGCTACTTTAGGAG AAGAAGCAACTAATCTAAAAAAAGAAAAAAATCTACTGTTAGAAAAAAATACTAAATTAGAGAATAGTTTAAGAGAAGTT AATAATTTAAAAAATGTATTAAATAAAGAAGTCGTAGAACTAAAAGAAAGAAATAAAATTCTTAATAAAAAGGTAGATGA ATCTAAAGGAAAAGAAGTAGATTTAAGAAGTAAATTACAAGAGTCAAGTGGAAAAATTAAAGAACTAGAAAATAAATGCA ATAATTTAGATAATAAGTTTAATGAGTTAAATATTTTAAATACAGATAATTCATTAGAACTTGAAAAAATGATTAAAGTT AAGACTAATCTAGAAGAAGAAAATTCTATTTTGATGAAAAAAAGTAAGTCTTTAGAAGATAATTGCTTAACTTTACAAAA AGATATAGAAGAATTAACATTACTAGTATCAAATGAAAAAAGTAATAAACAATTACTTCAAGAAGAGTATATTAAGTGTA AAAAAGAGCTTGAAAATATAAGCGATCTTTATTATGAAACTGATAAGGAAGTTATAAATTTCAAACAAAAAATAGAACAA ATTAATAAAGAAAATGAAAAATTAAATTCTAAGATAAATATAGAAGTGAAAAATAAAAGAGTATTAGAGGAAAATATTCA AAAATTAAATAGTAATATTAATTCAATAAATAATGAAAAAAGTAAAATAAAACAAGAAAATTCAAAATTAAGTGAAGAGC TTAAAATTCTAAGAGAAAAGAATTCTAAGTTGGTTTTTAACGAGGACAATAATAAAAAGACAATAAATATAAAACATAAG GAAATCGAAGAATTAAAAGGTGATTTAAGCAATAAAGACAAATCATTAATAGATATAAAAAGTATGTTAAATGGAAAAGA AAAGACATTAGAAAAATTAAAAGTTGACTTAGATGAAAAAGAGAAGAGCTTAGAAACCTTAAAAAATACTTTAAGCCAAA AGGATGCTTCTGTAGTAGAATTGGAAAATAAAGTTGAAGAATTAAATAAGCATAAGATTACACTTATGGAAAGAAGCAAA ACTGTAAATAATAATCTTAGAACATCTAAGTATAAAGTTATGGAATTAAAGGATAAACTATTAAATGTAGAAATAGAATT AGCAACATTAAAAAGACAACAATTATTAAATAGTAAAACAAAAAAAATTATAGCACCACTTTCACATAAAAAGTAG
Upstream 100 bases:
>100_bases AAATATTTTTATATCATAAGTATGTAGCAATATAATTGTGTTATGAGTGAATATAGAATATAATTAAATAATGAGAAAGA AATTTTAAGAGGTGTAATTT
Downstream 100 bases:
>100_bases GATAATATAATAGAATTATAACAATTTTAAAAACTGCTATTTTTAATAGCAGTTTTTAAAGGTTTTTAAGAATAATAAAA AGTACGATGCTTTGTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MIKVTVNINGMDYNLKGDKNEQYLVDLADFVDSKVKEIMSKNSRLSTSAATVLAAVNIADELYECDFNLRNAINKKKNIE TEKSELIQKVDKLNEDLKTTLVEKTKIQEQLVNGEQSLKEKYAEIEQQLATLGEEATNLKKEKNLLLEKNTKLENSLREV NNLKNVLNKEVVELKERNKILNKKVDESKGKEVDLRSKLQESSGKIKELENKCNNLDNKFNELNILNTDNSLELEKMIKV KTNLEEENSILMKKSKSLEDNCLTLQKDIEELTLLVSNEKSNKQLLQEEYIKCKKELENISDLYYETDKEVINFKQKIEQ INKENEKLNSKINIEVKNKRVLEENIQKLNSNINSINNEKSKIKQENSKLSEELKILREKNSKLVFNEDNNKKTINIKHK EIEELKGDLSNKDKSLIDIKSMLNGKEKTLEKLKVDLDEKEKSLETLKNTLSQKDASVVELENKVEELNKHKITLMERSK TVNNNLRTSKYKVMELKDKLLNVEIELATLKRQQLLNSKTKKIIAPLSHKK
Sequences:
>Translated_531_residues MIKVTVNINGMDYNLKGDKNEQYLVDLADFVDSKVKEIMSKNSRLSTSAATVLAAVNIADELYECDFNLRNAINKKKNIE TEKSELIQKVDKLNEDLKTTLVEKTKIQEQLVNGEQSLKEKYAEIEQQLATLGEEATNLKKEKNLLLEKNTKLENSLREV NNLKNVLNKEVVELKERNKILNKKVDESKGKEVDLRSKLQESSGKIKELENKCNNLDNKFNELNILNTDNSLELEKMIKV KTNLEEENSILMKKSKSLEDNCLTLQKDIEELTLLVSNEKSNKQLLQEEYIKCKKELENISDLYYETDKEVINFKQKIEQ INKENEKLNSKINIEVKNKRVLEENIQKLNSNINSINNEKSKIKQENSKLSEELKILREKNSKLVFNEDNNKKTINIKHK EIEELKGDLSNKDKSLIDIKSMLNGKEKTLEKLKVDLDEKEKSLETLKNTLSQKDASVVELENKVEELNKHKITLMERSK TVNNNLRTSKYKVMELKDKLLNVEIELATLKRQQLLNSKTKKIIAPLSHKK >Mature_531_residues MIKVTVNINGMDYNLKGDKNEQYLVDLADFVDSKVKEIMSKNSRLSTSAATVLAAVNIADELYECDFNLRNAINKKKNIE TEKSELIQKVDKLNEDLKTTLVEKTKIQEQLVNGEQSLKEKYAEIEQQLATLGEEATNLKKEKNLLLEKNTKLENSLREV NNLKNVLNKEVVELKERNKILNKKVDESKGKEVDLRSKLQESSGKIKELENKCNNLDNKFNELNILNTDNSLELEKMIKV KTNLEEENSILMKKSKSLEDNCLTLQKDIEELTLLVSNEKSNKQLLQEEYIKCKKELENISDLYYETDKEVINFKQKIEQ INKENEKLNSKINIEVKNKRVLEENIQKLNSNINSINNEKSKIKQENSKLSEELKILREKNSKLVFNEDNNKKTINIKHK EIEELKGDLSNKDKSLIDIKSMLNGKEKTLEKLKVDLDEKEKSLETLKNTLSQKDASVVELENKVEELNKHKITLMERSK TVNNNLRTSKYKVMELKDKLLNVEIELATLKRQQLLNSKTKKIIAPLSHKK
Specific function: Unknown
COG id: COG3027
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61560; Mature: 61560
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVTVNINGMDYNLKGDKNEQYLVDLADFVDSKVKEIMSKNSRLSTSAATVLAAVNIAD CEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ELYECDFNLRNAINKKKNIETEKSELIQKVDKLNEDLKTTLVEKTKIQEQLVNGEQSLKE HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KYAEIEQQLATLGEEATNLKKEKNLLLEKNTKLENSLREVNNLKNVLNKEVVELKERNKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNKKVDESKGKEVDLRSKLQESSGKIKELENKCNNLDNKFNELNILNTDNSLELEKMIKV HHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH KTNLEEENSILMKKSKSLEDNCLTLQKDIEELTLLVSNEKSNKQLLQEEYIKCKKELENI HCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SDLYYETDKEVINFKQKIEQINKENEKLNSKINIEVKNKRVLEENIQKLNSNINSINNEK HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHH SKIKQENSKLSEELKILREKNSKLVFNEDNNKKTINIKHKEIEELKGDLSNKDKSLIDIK HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHCCCCCCCHHHHHHH SMLNGKEKTLEKLKVDLDEKEKSLETLKNTLSQKDASVVELENKVEELNKHKITLMERSK HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHHHHHH TVNNNLRTSKYKVMELKDKLLNVEIELATLKRQQLLNSKTKKIIAPLSHKK HHCCCCCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIKVTVNINGMDYNLKGDKNEQYLVDLADFVDSKVKEIMSKNSRLSTSAATVLAAVNIAD CEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ELYECDFNLRNAINKKKNIETEKSELIQKVDKLNEDLKTTLVEKTKIQEQLVNGEQSLKE HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KYAEIEQQLATLGEEATNLKKEKNLLLEKNTKLENSLREVNNLKNVLNKEVVELKERNKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNKKVDESKGKEVDLRSKLQESSGKIKELENKCNNLDNKFNELNILNTDNSLELEKMIKV HHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH KTNLEEENSILMKKSKSLEDNCLTLQKDIEELTLLVSNEKSNKQLLQEEYIKCKKELENI HCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SDLYYETDKEVINFKQKIEQINKENEKLNSKINIEVKNKRVLEENIQKLNSNINSINNEK HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHH SKIKQENSKLSEELKILREKNSKLVFNEDNNKKTINIKHKEIEELKGDLSNKDKSLIDIK HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHCCCCCCCHHHHHHH SMLNGKEKTLEKLKVDLDEKEKSLETLKNTLSQKDASVVELENKVEELNKHKITLMERSK HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHHHHHH TVNNNLRTSKYKVMELKDKLLNVEIELATLKRQQLLNSKTKKIIAPLSHKK HHCCCCCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA