| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933250
Identifier: 187933250
GI number: 187933250
Start: 2076028
End: 2076237
Strand: Reverse
Name: 187933250
Synonym: CLL_A1997
Alternate gene names: NA
Gene position: 2076237-2076028 (Counterclockwise)
Preceding gene: 187934487
Following gene: 187935695
Centisome position: 54.63
GC content: 31.9
Gene sequence:
>210_bases ATGGAAAAACGTCAATATGTTTGTTCAAAATGCGGATGTAATAAATATGAGAGTGATCAATTTCAAGCAACTGGTGGAAA CTTTGCTAAGATATTCGATATTCAGAATAAGAAGTTTATTACAATATCCTGTTCTCAATGTGGTTATACAGAATTGTACA AGGCCAATACAAAGGGCGGATGGAATGTATTAGATTTTCTAATGAGTTAA
Upstream 100 bases:
>100_bases ATAAATAAAAATATTAAAAATAATAAGAAATGTAATGTTCGTTAGAAGGATAAGTAGCTTTTTATCAAATATTACAACTA AATTATACAAGGAGGATGTT
Downstream 100 bases:
>100_bases TTTACGTACTAATAGATATATATTAAAGAAAAATTTTCTTATTTTTATAACAAAACAAGGCTTTAAATAATATTATTTAA AGCCTTGTTTTGAATCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MEKRQYVCSKCGCNKYESDQFQATGGNFAKIFDIQNKKFITISCSQCGYTELYKANTKGGWNVLDFLMS
Sequences:
>Translated_69_residues MEKRQYVCSKCGCNKYESDQFQATGGNFAKIFDIQNKKFITISCSQCGYTELYKANTKGGWNVLDFLMS >Mature_69_residues MEKRQYVCSKCGCNKYESDQFQATGGNFAKIFDIQNKKFITISCSQCGYTELYKANTKGGWNVLDFLMS
Specific function: Unknown
COG id: COG3478
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7882; Mature: 7882
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKRQYVCSKCGCNKYESDQFQATGGNFAKIFDIQNKKFITISCSQCGYTELYKANTKGG CCCCCCHHHHCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCC WNVLDFLMS HHHHHHHCC >Mature Secondary Structure MEKRQYVCSKCGCNKYESDQFQATGGNFAKIFDIQNKKFITISCSQCGYTELYKANTKGG CCCCCCHHHHCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCC WNVLDFLMS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA