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The map label for this gene is agaD [H]

Identifier: 187933169

GI number: 187933169

Start: 3241402

End: 3242250

Strand: Reverse

Name: agaD [H]

Synonym: CLL_A3131

Alternate gene names: 187933169

Gene position: 3242250-3241402 (Counterclockwise)

Preceding gene: 187935290

Following gene: 187933736

Centisome position: 85.32

GC content: 29.8

Gene sequence:

>849_bases
ATGGAATCTAATGTAGCATATAAAGAACCTACCCCTAAAAAGGTAATTACTAATAAAGATTTAAATCATATGGTTTGGCG
TTCACTTTTTTTACAAGCATCTTTTAACTATGAAAGAATGCAAGGTTGTGGATGGCTTTATGGATTAATACCAGGATTAA
AGAAGATTCATACAAATAAAGAAGACCTTTCTCAAGCAATGAAAGATCATATGGAATTTTTCAATACCCATCCATTCTTA
GTAACTTTCATTATGGGATTAGTATTAGCAATGGAAGAAAATAAAGAAGATAGAAGCACAATAAGAGCAATAAAGGTTGC
AACCATGGGACCTTTAGGTGGTATTGGAGATGCATTATTCTGGTTGACAGCATTACCAATTTGTGTTGGTATAGGAGCTT
CTATGGCAATGGAAGGAAATGTAGCAGGACCTATAGTTTTCTTAATAATGTTTAATGCATTACATTTCTTTTTAAGGTTC
TTTTTAATGAAATATGGATATAACACAGGTGTTAAGGCTCTTTCTTCATTAAAAGAACAAACAAAGAAAATATCTCATGC
AGCGTCAATATTAGGTTTAACAGTTGTTGGTGGATTAATAGCATCAATGGTTAATTTAAAAACAACAATGGTAATTCCAT
TAGGTTCAGTTACTGGTGGTTCATCAATAAAATTACAAGAGGGCGTTTTAGATCAAGTAATGCCTAATATGTTAGCTTTA
TTATATACATTTTTAATGTATAAGTTATTAAAGAAAGGTTATTCACCAATTAAATTAATAACAATTACAATTTGTTTAGG
TTTAATTGCAAAATTTATAGAACACATTACACATTTCCCAATATTATAA

Upstream 100 bases:

>100_bases
ATTTTAGGATTAGCTTTAGTTGGCTTAAGTATAGCATTATATGATTATTATTCAGCTAGTAATAAGAAAGTAGCAAAAGT
TGCAGAGGAGGAATATGAAG

Downstream 100 bases:

>100_bases
TAGATAAGTTTCAATAGAGGAATTTCTAAATTTTAGGTGGGGTTTTAGCTCCATCTGAAATTTAGAAGTTATTAATTTAT
TTTATAAATAATAATAGAAC

Product: PTS system mannose/fructose/sorbose family IID component

Products: NA

Alternate protein names: EIID-Aga; PTS system N-acetylgalactosamine-specific EIID component [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MESNVAYKEPTPKKVITNKDLNHMVWRSLFLQASFNYERMQGCGWLYGLIPGLKKIHTNKEDLSQAMKDHMEFFNTHPFL
VTFIMGLVLAMEENKEDRSTIRAIKVATMGPLGGIGDALFWLTALPICVGIGASMAMEGNVAGPIVFLIMFNALHFFLRF
FLMKYGYNTGVKALSSLKEQTKKISHAASILGLTVVGGLIASMVNLKTTMVIPLGSVTGGSSIKLQEGVLDQVMPNMLAL
LYTFLMYKLLKKGYSPIKLITITICLGLIAKFIEHITHFPIL

Sequences:

>Translated_282_residues
MESNVAYKEPTPKKVITNKDLNHMVWRSLFLQASFNYERMQGCGWLYGLIPGLKKIHTNKEDLSQAMKDHMEFFNTHPFL
VTFIMGLVLAMEENKEDRSTIRAIKVATMGPLGGIGDALFWLTALPICVGIGASMAMEGNVAGPIVFLIMFNALHFFLRF
FLMKYGYNTGVKALSSLKEQTKKISHAASILGLTVVGGLIASMVNLKTTMVIPLGSVTGGSSIKLQEGVLDQVMPNMLAL
LYTFLMYKLLKKGYSPIKLITITICLGLIAKFIEHITHFPIL
>Mature_282_residues
MESNVAYKEPTPKKVITNKDLNHMVWRSLFLQASFNYERMQGCGWLYGLIPGLKKIHTNKEDLSQAMKDHMEFFNTHPFL
VTFIMGLVLAMEENKEDRSTIRAIKVATMGPLGGIGDALFWLTALPICVGIGASMAMEGNVAGPIVFLIMFNALHFFLRF
FLMKYGYNTGVKALSSLKEQTKKISHAASILGLTVVGGLIASMVNLKTTMVIPLGSVTGGSSIKLQEGVLDQVMPNMLAL
LYTFLMYKLLKKGYSPIKLITITICLGLIAKFIEHITHFPIL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3716

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIID domain [H]

Homologues:

Organism=Escherichia coli, GI1789529, Length=258, Percent_Identity=46.8992248062016, Blast_Score=232, Evalue=2e-62,
Organism=Escherichia coli, GI1788122, Length=276, Percent_Identity=34.4202898550725, Blast_Score=183, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004704
- InterPro:   IPR018405 [H]

Pfam domain/function: PF03613 EIID-AGA [H]

EC number: NA

Molecular weight: Translated: 31284; Mature: 31284

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS51108 PTS_EIID

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10931310; 9278503; 8932697 [H]