| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933164
Identifier: 187933164
GI number: 187933164
Start: 2840210
End: 2841247
Strand: Reverse
Name: 187933164
Synonym: CLL_A2735
Alternate gene names: NA
Gene position: 2841247-2840210 (Counterclockwise)
Preceding gene: 187935683
Following gene: 187934089
Centisome position: 74.76
GC content: 29.0
Gene sequence:
>1038_bases ATGAAAATAAGTGAATTTATAAATTCAAAACAAATAGCACTTTATATTAACAATTTACCACCACAAACTAATATTGATGA GGCTTTATTTCCATCAGACAAGCAATTGAGTATGGAACTTGAACTTGCCAAAGGTGCTAAACAAAGACCAGTTGCTTTAA AAATGTCTACATTTGATGTAGCTGCAAAAGTTAGAGCTTTAAAAGCTAATGTAAATGTAGAAAAGAAGGAGATGCCTTTC TTTAAAGAAGCAGTAGGGATTAAAGAAAAAGATAGAAGAAAGTTAATTGAAGCTAAAAATTCAAACAATCAAAATCTTAT AGATTTCATGCTTAAGCAAGTATTTGATAATTATGCTAATTTAGTTGGCGGTGCTGATGTACAAGCCACTAGGATGAGAG CACAAGTAATTCAAAAAGGTGAAATAAATATTGTAACAGATGATGGAGATATAGTAGTAGATTATGGAATACCATTAGAA CATAAAGAAGTATTATCAGGTAGTGCAAAATGGAGTGATCCAAGCGCTGATATAGTAAATGATATAAAAAGATGGCAAAA GAAATTTACTGATTCTGGATCTGAAAAACCTACAAGAATGTTATTAACTGAAAAAACTTTTAGTTATATAACTATTAATG AAGCAATAACTAAAGATTTAAAATCTAGAACATTAGGAGAAGTAATAATAACAGATGAAGACTATATTTCATTCTTAAAG AAAAAGTTAAGTTTAGAAATAGCCTTTTTAAATGGTGTATATGTAGATGAACAAGAGAAAAAACAAAATTATTATGAAGA TAATCTAGTTACGTTAATACCTAAAGGCACGCTAGGAAAAACAATTTATTCAATAACACCTGAAGAATACGATAAAATTT ATGGAAGTCAAACAATAGATACAGAAGTAATTAAAACTGGTATAGCAATTACAACTATGGTTAAGGAAGATCCGGTTGCA GTAGATACTAAGGTATCTCAAATTGTATTACCATCATTTGATAATGCAGAAGAATGTTTCTTTGCAACAGTAGGTTAA
Upstream 100 bases:
>100_bases ATACATGGATTTATTAATAGTAAAGCTATTGAAGATAAACCAACAGCTGAAGCTATAGCTGCATTAAAACAAATAACATT TATGTAAGGAGGAATACTTA
Downstream 100 bases:
>100_bases GAGTGTGGTTAATTTAAACCACGCTCTTTTATTATATTAAAATGAAGGGATGATAGATATGGCAAAATCAAAACAATGTG TATGCAAAGCTACAGCTTTA
Product: phage protein
Products: NA
Alternate protein names: Phage Capsid Protein; Phage Head Protein; Phage-Like Protein; Prophage Head Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKISEFINSKQIALYINNLPPQTNIDEALFPSDKQLSMELELAKGAKQRPVALKMSTFDVAAKVRALKANVNVEKKEMPF FKEAVGIKEKDRRKLIEAKNSNNQNLIDFMLKQVFDNYANLVGGADVQATRMRAQVIQKGEINIVTDDGDIVVDYGIPLE HKEVLSGSAKWSDPSADIVNDIKRWQKKFTDSGSEKPTRMLLTEKTFSYITINEAITKDLKSRTLGEVIITDEDYISFLK KKLSLEIAFLNGVYVDEQEKKQNYYEDNLVTLIPKGTLGKTIYSITPEEYDKIYGSQTIDTEVIKTGIAITTMVKEDPVA VDTKVSQIVLPSFDNAEECFFATVG
Sequences:
>Translated_345_residues MKISEFINSKQIALYINNLPPQTNIDEALFPSDKQLSMELELAKGAKQRPVALKMSTFDVAAKVRALKANVNVEKKEMPF FKEAVGIKEKDRRKLIEAKNSNNQNLIDFMLKQVFDNYANLVGGADVQATRMRAQVIQKGEINIVTDDGDIVVDYGIPLE HKEVLSGSAKWSDPSADIVNDIKRWQKKFTDSGSEKPTRMLLTEKTFSYITINEAITKDLKSRTLGEVIITDEDYISFLK KKLSLEIAFLNGVYVDEQEKKQNYYEDNLVTLIPKGTLGKTIYSITPEEYDKIYGSQTIDTEVIKTGIAITTMVKEDPVA VDTKVSQIVLPSFDNAEECFFATVG >Mature_345_residues MKISEFINSKQIALYINNLPPQTNIDEALFPSDKQLSMELELAKGAKQRPVALKMSTFDVAAKVRALKANVNVEKKEMPF FKEAVGIKEKDRRKLIEAKNSNNQNLIDFMLKQVFDNYANLVGGADVQATRMRAQVIQKGEINIVTDDGDIVVDYGIPLE HKEVLSGSAKWSDPSADIVNDIKRWQKKFTDSGSEKPTRMLLTEKTFSYITINEAITKDLKSRTLGEVIITDEDYISFLK KKLSLEIAFLNGVYVDEQEKKQNYYEDNLVTLIPKGTLGKTIYSITPEEYDKIYGSQTIDTEVIKTGIAITTMVKEDPVA VDTKVSQIVLPSFDNAEECFFATVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38817; Mature: 38817
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISEFINSKQIALYINNLPPQTNIDEALFPSDKQLSMELELAKGAKQRPVALKMSTFDV CCCHHHHCCCEEEEEEECCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCEEEEEEHHHH AAKVRALKANVNVEKKEMPFFKEAVGIKEKDRRKLIEAKNSNNQNLIDFMLKQVFDNYAN HHHHHHHHCCCCCCHHHCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LVGGADVQATRMRAQVIQKGEINIVTDDGDIVVDYGIPLEHKEVLSGSAKWSDPSADIVN HCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCHHHHH DIKRWQKKFTDSGSEKPTRMLLTEKTFSYITINEAITKDLKSRTLGEVIITDEDYISFLK HHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHCCCEEEEECHHHHHHHH KKLSLEIAFLNGVYVDEQEKKQNYYEDNLVTLIPKGTLGKTIYSITPEEYDKIYGSQTID HHHCEEEEEECCEEECCHHHHHCCCCCCEEEEEECCCCCCEEEECCHHHHHHHCCCCCCC TEVIKTGIAITTMVKEDPVAVDTKVSQIVLPSFDNAEECFFATVG HHHHHCCCEEEEEECCCCCEECCCHHEEEECCCCCCCCEEEEECC >Mature Secondary Structure MKISEFINSKQIALYINNLPPQTNIDEALFPSDKQLSMELELAKGAKQRPVALKMSTFDV CCCHHHHCCCEEEEEEECCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCEEEEEEHHHH AAKVRALKANVNVEKKEMPFFKEAVGIKEKDRRKLIEAKNSNNQNLIDFMLKQVFDNYAN HHHHHHHHCCCCCCHHHCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LVGGADVQATRMRAQVIQKGEINIVTDDGDIVVDYGIPLEHKEVLSGSAKWSDPSADIVN HCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCHHHHH DIKRWQKKFTDSGSEKPTRMLLTEKTFSYITINEAITKDLKSRTLGEVIITDEDYISFLK HHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHCCCEEEEECHHHHHHHH KKLSLEIAFLNGVYVDEQEKKQNYYEDNLVTLIPKGTLGKTIYSITPEEYDKIYGSQTID HHHCEEEEEECCEEECCHHHHHCCCCCCEEEEEECCCCCCEEEECCHHHHHHHCCCCCCC TEVIKTGIAITTMVKEDPVAVDTKVSQIVLPSFDNAEECFFATVG HHHHHCCCEEEEEECCCCCEECCCHHEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA