| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933067
Identifier: 187933067
GI number: 187933067
Start: 2208819
End: 2209256
Strand: Reverse
Name: 187933067
Synonym: CLL_A2111
Alternate gene names: NA
Gene position: 2209256-2208819 (Counterclockwise)
Preceding gene: 187934656
Following gene: 187934048
Centisome position: 58.13
GC content: 24.2
Gene sequence:
>438_bases ATGAGCGGAATACTAAATAAGTATGGAGAATCAATTAACTTAACATATAATTATGTTTATAGAATGTTAACACATCTAAA GAATATTAGAGATAATTTTAATGCTATTGAAAATCCAGATGATATAACAAAAGAAGTATATAGGGATTCAATAATAAAAA AATATGAAATGTTAGAAGATTTAACTTGGAAGTTATTATCTAAGATATTTAAAGATTCGGGTCTTGAAATAAATAATCCT AAAGGGTGTTATAGGCAAGCATTTAAAAATGGTTGGATAGATAATATTGATATATGGAATGATATCTTATTATCAAGGAA CACTACAGCTCACATATATAATGAACAAGAATATGAAGAAATTAAGAATAAAATAATTGAAGAGTATATTGTTGCTATAG AAAAGTTATTGTTAAATATATCTAGTGAAGTGATGTGA
Upstream 100 bases:
>100_bases TCAATTAATTTTTTTATACTATGTGTGTAAATGTTGAATTAACATTAAATAATATGTACAATTAAATATAAAATAACTTA TTATGATAAGGAGATATGGA
Downstream 100 bases:
>100_bases TAGATATGTATGGAATAAATGAAAAAGTTTATAATAATCTTTTAGTATATTTTGAAAAAGAAAAGGATATAAATAAAGTT ATCTTATTTGGATCAAGAGC
Product: nucleotidyltransferase substrate binding protein, family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSGILNKYGESINLTYNYVYRMLTHLKNIRDNFNAIENPDDITKEVYRDSIIKKYEMLEDLTWKLLSKIFKDSGLEINNP KGCYRQAFKNGWIDNIDIWNDILLSRNTTAHIYNEQEYEEIKNKIIEEYIVAIEKLLLNISSEVM
Sequences:
>Translated_145_residues MSGILNKYGESINLTYNYVYRMLTHLKNIRDNFNAIENPDDITKEVYRDSIIKKYEMLEDLTWKLLSKIFKDSGLEINNP KGCYRQAFKNGWIDNIDIWNDILLSRNTTAHIYNEQEYEEIKNKIIEEYIVAIEKLLLNISSEVM >Mature_144_residues SGILNKYGESINLTYNYVYRMLTHLKNIRDNFNAIENPDDITKEVYRDSIIKKYEMLEDLTWKLLSKIFKDSGLEINNPK GCYRQAFKNGWIDNIDIWNDILLSRNTTAHIYNEQEYEEIKNKIIEEYIVAIEKLLLNISSEVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17236; Mature: 17105
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGILNKYGESINLTYNYVYRMLTHLKNIRDNFNAIENPDDITKEVYRDSIIKKYEMLED CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LTWKLLSKIFKDSGLEINNPKGCYRQAFKNGWIDNIDIWNDILLSRNTTAHIYNEQEYEE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHH IKNKIIEEYIVAIEKLLLNISSEVM HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGILNKYGESINLTYNYVYRMLTHLKNIRDNFNAIENPDDITKEVYRDSIIKKYEMLED CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LTWKLLSKIFKDSGLEINNPKGCYRQAFKNGWIDNIDIWNDILLSRNTTAHIYNEQEYEE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHH IKNKIIEEYIVAIEKLLLNISSEVM HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA