| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933053
Identifier: 187933053
GI number: 187933053
Start: 2854500
End: 2854988
Strand: Reverse
Name: 187933053
Synonym: CLL_A2758
Alternate gene names: NA
Gene position: 2854988-2854500 (Counterclockwise)
Preceding gene: 187934551
Following gene: 187935572
Centisome position: 75.12
GC content: 29.45
Gene sequence:
>489_bases ATGGTAAAGAAGAATCCGGGAAAGCTATTTGAAGAAGATTTCAAAAAGTCAGTTCCTGAAGATTGTTGGATATATAGATT TAAAGATGGTACAGCAAATTTTGGAGGAACTAAAAATGAGAATGTAAGATTTCAAGCTCATAATATATGTGACTTCCAGG TAATGACTAATGATTATTTAGTATTATTGGAACTTAAATCTCATGCAGGTGCTAGTATTCCTTTCAACTGTATTAGAAGT AACCAAATAGAAGAAATGTCCAATATCCAGCATTCAAAGATTAAAGCATATTTTATATTTAACTTTAGGGATTATGAAAA GACTTATGCAATAGAAGCTAAGGAGTTAAAAGAATATATAGATACTGCTAATAGAAGGTCAATACCTTTAGGGTGGTGCA AAGCAAATGGAATTGAAATTATAGGAAATAAGAAAAAGATTAGATATGGATATGAGTTAAAAAGGTTTTTTGAAGGTATA CAAGATTAA
Upstream 100 bases:
>100_bases CTAAAAGAAGAGAGCGTAAAGAAAATGAATTTCTTGCTTATCAAAAATATCATACTGAAAAGAAAAAATGTAGATGGAGT GTGAAGAAAGGCGGATACAA
Downstream 100 bases:
>100_bases AACTTGCAAATAAAAACAGAGTTACAAGGCATGGTACAAGCTTAATTGCAAGTGTACATGCCTTAGTAATTCAAAAAGGA GGATAAGATGTTAAATAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MVKKNPGKLFEEDFKKSVPEDCWIYRFKDGTANFGGTKNENVRFQAHNICDFQVMTNDYLVLLELKSHAGASIPFNCIRS NQIEEMSNIQHSKIKAYFIFNFRDYEKTYAIEAKELKEYIDTANRRSIPLGWCKANGIEIIGNKKKIRYGYELKRFFEGI QD
Sequences:
>Translated_162_residues MVKKNPGKLFEEDFKKSVPEDCWIYRFKDGTANFGGTKNENVRFQAHNICDFQVMTNDYLVLLELKSHAGASIPFNCIRS NQIEEMSNIQHSKIKAYFIFNFRDYEKTYAIEAKELKEYIDTANRRSIPLGWCKANGIEIIGNKKKIRYGYELKRFFEGI QD >Mature_162_residues MVKKNPGKLFEEDFKKSVPEDCWIYRFKDGTANFGGTKNENVRFQAHNICDFQVMTNDYLVLLELKSHAGASIPFNCIRS NQIEEMSNIQHSKIKAYFIFNFRDYEKTYAIEAKELKEYIDTANRRSIPLGWCKANGIEIIGNKKKIRYGYELKRFFEGI QD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19014; Mature: 19014
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKNPGKLFEEDFKKSVPEDCWIYRFKDGTANFGGTKNENVRFQAHNICDFQVMTNDYL CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCEE VLLELKSHAGASIPFNCIRSNQIEEMSNIQHSKIKAYFIFNFRDYEKTYAIEAKELKEYI EEEEECCCCCCCCCHHHHCCCHHHHHHCCCHHEEEEEEEEEEECCCCEEEECHHHHHHHH DTANRRSIPLGWCKANGIEIIGNKKKIRYGYELKRFFEGIQD HCCCCCCCCEEEECCCCEEEEECCEEEEECHHHHHHHHHHCC >Mature Secondary Structure MVKKNPGKLFEEDFKKSVPEDCWIYRFKDGTANFGGTKNENVRFQAHNICDFQVMTNDYL CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCEE VLLELKSHAGASIPFNCIRSNQIEEMSNIQHSKIKAYFIFNFRDYEKTYAIEAKELKEYI EEEEECCCCCCCCCHHHHCCCHHHHHHCCCHHEEEEEEEEEEECCCCEEEECHHHHHHHH DTANRRSIPLGWCKANGIEIIGNKKKIRYGYELKRFFEGIQD HCCCCCCCCEEEECCCCEEEEECCEEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA