| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187933047
Identifier: 187933047
GI number: 187933047
Start: 2844031
End: 2845041
Strand: Reverse
Name: 187933047
Synonym: CLL_A2742
Alternate gene names: NA
Gene position: 2845041-2844031 (Counterclockwise)
Preceding gene: 187934797
Following gene: 187935595
Centisome position: 74.86
GC content: 28.68
Gene sequence:
>1011_bases ATGAACTCTTATAAAAAGAAAATACTTGAAGCTAGAAAGCAAGTACTTAAATTAACAATTGAACAAGAAAAGCAAATAAT AGAAATATATAGTAAAGCTTCAAGTAAACTTATTGATGATATTCTTGATATGCCAGATAGTAGAACTAAAACACATAAAA TAGATTGTGCTAAGATAATCAATAATTACACTAAAGAACTGTATGAAAATCTTAACAATAATATTTTAGAAAATACTTGG GAAAGTTCTTATATACAAAGAAAGGTAATATTAGATTTTGCAGATCAAGTTGCACCAAATAGACATATAAGTGATAGACT AAAGAATAATATTACAAAAATATCTGATAATGCTGTAAGAACGCTTATAGCTGGAGGATATTATGAAGATGGCAAAACAC TTAGTAAAAGACTATGGAATATTACAAAAGAAAATGGAAAAAATATTGATACTCTAATAAAAACCAATATTGCTGGTGGT GCAAATGTAAGAACTCTAGCAAATGAGTTAGAGAAGTATGTTAATCCTAAAAAAAGACTTGTAAGTAAGAGTTTTAAAGC AGGAATAAACAGTTATAAAATTTCTTACAATGCACAAAGATTAGCAAGGACAAGTATCACTCATGCAGCTGCAGAAACAC AAATTCAAAATGCAAAAAGAAATCCCTTTAGTTTAGGGTTAAAATGGAATTTGAGTGCTAGTCATTCTGCACGTATGCAT GGAAAACAAGATGAATGTGATGATAGAGAAGGAAAAGTATATAAGCCTAGCGAGACACCACTTCAACATCCTAATTGCTT ATGTTTCTTTACAGAAGAGGTTGATACTGAAAAAGCTATTAAAGAATTGAAAAAATGGAGTAATGGGGCAAGTAATCCTA AAATTGATAAATGGTATGGAGAAGAATACACCCCGAAAGACATAAGTAATAAATCTACTAAAACAATAGCAAGAGTTGAT AATAAAAATGGAAAGATAAAGATTAGTAACATTTACTTATTAAATAAGTAG
Upstream 100 bases:
>100_bases AACTTTATTAAATCAAGCACAAGATACTCTTATTGGTGGAACTAATACTGATATAGACGATATAGATAATGAATTAAAAG AAGAATAGTGGTGAATAACT
Downstream 100 bases:
>100_bases ATGCTTTTTTTATATTTAAAATTATGTTAAAGAAAAAGTGAGAAGAAATTGAGAAAAACTTGAGAATTTTATTTTAAAAT ATATGATAAAATAAAGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNSYKKKILEARKQVLKLTIEQEKQIIEIYSKASSKLIDDILDMPDSRTKTHKIDCAKIINNYTKELYENLNNNILENTW ESSYIQRKVILDFADQVAPNRHISDRLKNNITKISDNAVRTLIAGGYYEDGKTLSKRLWNITKENGKNIDTLIKTNIAGG ANVRTLANELEKYVNPKKRLVSKSFKAGINSYKISYNAQRLARTSITHAAAETQIQNAKRNPFSLGLKWNLSASHSARMH GKQDECDDREGKVYKPSETPLQHPNCLCFFTEEVDTEKAIKELKKWSNGASNPKIDKWYGEEYTPKDISNKSTKTIARVD NKNGKIKISNIYLLNK
Sequences:
>Translated_336_residues MNSYKKKILEARKQVLKLTIEQEKQIIEIYSKASSKLIDDILDMPDSRTKTHKIDCAKIINNYTKELYENLNNNILENTW ESSYIQRKVILDFADQVAPNRHISDRLKNNITKISDNAVRTLIAGGYYEDGKTLSKRLWNITKENGKNIDTLIKTNIAGG ANVRTLANELEKYVNPKKRLVSKSFKAGINSYKISYNAQRLARTSITHAAAETQIQNAKRNPFSLGLKWNLSASHSARMH GKQDECDDREGKVYKPSETPLQHPNCLCFFTEEVDTEKAIKELKKWSNGASNPKIDKWYGEEYTPKDISNKSTKTIARVD NKNGKIKISNIYLLNK >Mature_336_residues MNSYKKKILEARKQVLKLTIEQEKQIIEIYSKASSKLIDDILDMPDSRTKTHKIDCAKIINNYTKELYENLNNNILENTW ESSYIQRKVILDFADQVAPNRHISDRLKNNITKISDNAVRTLIAGGYYEDGKTLSKRLWNITKENGKNIDTLIKTNIAGG ANVRTLANELEKYVNPKKRLVSKSFKAGINSYKISYNAQRLARTSITHAAAETQIQNAKRNPFSLGLKWNLSASHSARMH GKQDECDDREGKVYKPSETPLQHPNCLCFFTEEVDTEKAIKELKKWSNGASNPKIDKWYGEEYTPKDISNKSTKTIARVD NKNGKIKISNIYLLNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38460; Mature: 38460
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSYKKKILEARKQVLKLTIEQEKQIIEIYSKASSKLIDDILDMPDSRTKTHKIDCAKII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH NNYTKELYENLNNNILENTWESSYIQRKVILDFADQVAPNRHISDRLKNNITKISDNAVR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH TLIAGGYYEDGKTLSKRLWNITKENGKNIDTLIKTNIAGGANVRTLANELEKYVNPKKRL HHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHH VSKSFKAGINSYKISYNAQRLARTSITHAAAETQIQNAKRNPFSLGLKWNLSASHSARMH HHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCC GKQDECDDREGKVYKPSETPLQHPNCLCFFTEEVDTEKAIKELKKWSNGASNPKIDKWYG CCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC EEYTPKDISNKSTKTIARVDNKNGKIKISNIYLLNK CCCCCCCCCCCCHHHHHEEECCCCEEEEEEEEEECC >Mature Secondary Structure MNSYKKKILEARKQVLKLTIEQEKQIIEIYSKASSKLIDDILDMPDSRTKTHKIDCAKII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH NNYTKELYENLNNNILENTWESSYIQRKVILDFADQVAPNRHISDRLKNNITKISDNAVR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH TLIAGGYYEDGKTLSKRLWNITKENGKNIDTLIKTNIAGGANVRTLANELEKYVNPKKRL HHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHH VSKSFKAGINSYKISYNAQRLARTSITHAAAETQIQNAKRNPFSLGLKWNLSASHSARMH HHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCC GKQDECDDREGKVYKPSETPLQHPNCLCFFTEEVDTEKAIKELKKWSNGASNPKIDKWYG CCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC EEYTPKDISNKSTKTIARVDNKNGKIKISNIYLLNK CCCCCCCCCCCCHHHHHEEECCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA