| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187932990
Identifier: 187932990
GI number: 187932990
Start: 2978634
End: 2979572
Strand: Reverse
Name: 187932990
Synonym: CLL_A2899
Alternate gene names: NA
Gene position: 2979572-2978634 (Counterclockwise)
Preceding gene: 187933199
Following gene: 187933981
Centisome position: 78.4
GC content: 26.2
Gene sequence:
>939_bases ATGAATAATCCTTTTGATATACTTATATACTTAGATGAAAACTTAGTTAGAAATTTATCTTCTCTAGTTTTATCAGGATA TATAGATACTAGAATTCAAAAAAGAATTAGAGATGCAAAAGTTTCTGAAGGAATTCATTTTGATAACAGGAATGGTTCTT TTCAACAAGAAACTGAGGGAAGAAATGAAAGAGAAGGATTTAGAGATGAGAATACAGGTAATCTTACAAATGTAGAAGAG CACAATCAAATATGGAGAGATTTTAATGGAACAGGAAATGTAAGGTTAGAAGAAGAGATACGTAGGACATATACAACATT TGTTCTTAATGGAAATCTTAATAATTTTTTTAACAAAGGTGAAATTTTACGATCTAGAAATGCAGTTAATATATTAAATG ACGAAGTAGAATCAGGAGAATTAGTAGAAATTACAGGCAAAATAACTAATCAGTCATTAATTTCTTATGTAGATACATTA ATTACCTTACTAAGTGCAATAGGGTGTGAAAATTTAGATCCTCTATTAGATAAAGAAAAATATAAATTTATAAATTTTTC AGTATTATTAAATTTATTAAATAAATTAAAAGAAACATTAACATTAAATAATACTCAAGATTTAATTATGACAACAGGGG ATTGTACTACAGTTCTAACTGTTAATAATAATAATTTTATGAATAACGACTATAATATATTTGATAAAATTAATTGTGAT TGTAAAGTTGTTGGTAAAGTTGTGAAAACGTGTTGTGGATCAGGTTGTATAAATTTCTTGCGAAAAACTGGGACTGAAAA ATTTTATGAAGATCTTTTGATTTATTGTGATTCTCTCTTAGAATGTCTAAAGGAGAATGGAATAATGGTTCCAGAAAGAC CTTGTTGTAAAGTTGAGAATAAAGGGATACAATTAATGCCAATAAGCATTTCTATTTAA
Upstream 100 bases:
>100_bases ATGCCGCATCATTGTTCCTGTACTGAGTTTGGAAAGGGTGCATGGCTAAAAAATCGACGTTATAAAGTCGATTGACGATT TTTTTATAAGGAGAGAAGTT
Downstream 100 bases:
>100_bases CGATAGTTATGCTTATTTGTATTTAAAATAAAAACACTTGTTTTCTGTATAAGGACATGATAATATAGATATTAAGAAAA GGCATGTCTAATTAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MNNPFDILIYLDENLVRNLSSLVLSGYIDTRIQKRIRDAKVSEGIHFDNRNGSFQQETEGRNEREGFRDENTGNLTNVEE HNQIWRDFNGTGNVRLEEEIRRTYTTFVLNGNLNNFFNKGEILRSRNAVNILNDEVESGELVEITGKITNQSLISYVDTL ITLLSAIGCENLDPLLDKEKYKFINFSVLLNLLNKLKETLTLNNTQDLIMTTGDCTTVLTVNNNNFMNNDYNIFDKINCD CKVVGKVVKTCCGSGCINFLRKTGTEKFYEDLLIYCDSLLECLKENGIMVPERPCCKVENKGIQLMPISISI
Sequences:
>Translated_312_residues MNNPFDILIYLDENLVRNLSSLVLSGYIDTRIQKRIRDAKVSEGIHFDNRNGSFQQETEGRNEREGFRDENTGNLTNVEE HNQIWRDFNGTGNVRLEEEIRRTYTTFVLNGNLNNFFNKGEILRSRNAVNILNDEVESGELVEITGKITNQSLISYVDTL ITLLSAIGCENLDPLLDKEKYKFINFSVLLNLLNKLKETLTLNNTQDLIMTTGDCTTVLTVNNNNFMNNDYNIFDKINCD CKVVGKVVKTCCGSGCINFLRKTGTEKFYEDLLIYCDSLLECLKENGIMVPERPCCKVENKGIQLMPISISI >Mature_312_residues MNNPFDILIYLDENLVRNLSSLVLSGYIDTRIQKRIRDAKVSEGIHFDNRNGSFQQETEGRNEREGFRDENTGNLTNVEE HNQIWRDFNGTGNVRLEEEIRRTYTTFVLNGNLNNFFNKGEILRSRNAVNILNDEVESGELVEITGKITNQSLISYVDTL ITLLSAIGCENLDPLLDKEKYKFINFSVLLNLLNKLKETLTLNNTQDLIMTTGDCTTVLTVNNNNFMNNDYNIFDKINCD CKVVGKVVKTCCGSGCINFLRKTGTEKFYEDLLIYCDSLLECLKENGIMVPERPCCKVENKGIQLMPISISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35588; Mature: 35588
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPFDILIYLDENLVRNLSSLVLSGYIDTRIQKRIRDAKVSEGIHFDNRNGSFQQETEG CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHCC RNEREGFRDENTGNLTNVEEHNQIWRDFNGTGNVRLEEEIRRTYTTFVLNGNLNNFFNKG CCHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHEEEEEECCCHHHHCCC EILRSRNAVNILNDEVESGELVEITGKITNQSLISYVDTLITLLSAIGCENLDPLLDKEK HHHHCCCCHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHH YKFINFSVLLNLLNKLKETLTLNNTQDLIMTTGDCTTVLTVNNNNFMNNDYNIFDKINCD HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCEEECCCCC CKVVGKVVKTCCGSGCINFLRKTGTEKFYEDLLIYCDSLLECLKENGIMVPERPCCKVEN HHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCC KGIQLMPISISI CCEEEEEEEEEC >Mature Secondary Structure MNNPFDILIYLDENLVRNLSSLVLSGYIDTRIQKRIRDAKVSEGIHFDNRNGSFQQETEG CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHCC RNEREGFRDENTGNLTNVEEHNQIWRDFNGTGNVRLEEEIRRTYTTFVLNGNLNNFFNKG CCHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHEEEEEECCCHHHHCCC EILRSRNAVNILNDEVESGELVEITGKITNQSLISYVDTLITLLSAIGCENLDPLLDKEK HHHHCCCCHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHH YKFINFSVLLNLLNKLKETLTLNNTQDLIMTTGDCTTVLTVNNNNFMNNDYNIFDKINCD HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCEEECCCCC CKVVGKVVKTCCGSGCINFLRKTGTEKFYEDLLIYCDSLLECLKENGIMVPERPCCKVEN HHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCC KGIQLMPISISI CCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA