| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932938
Identifier: 187932938
GI number: 187932938
Start: 2356594
End: 2357439
Strand: Reverse
Name: 187932938
Synonym: CLL_A2281
Alternate gene names: NA
Gene position: 2357439-2356594 (Counterclockwise)
Preceding gene: 187933136
Following gene: 187933743
Centisome position: 62.03
GC content: 27.78
Gene sequence:
>846_bases ATGAAAATTAATAAGAGAGATTATGAGTATGAGAATATATATAACAGACTATTAAGAGAAGAAACAAAGGAAGAATTAAT AGAAGATCTTAGAATAAATCAGAATTATGTATATTGGAGAAAAAAGATAACAAGTGGAAAGATAGTAGAACTAGAAATAT ATCCAGTATGGAAATGTAAGCATGATATACCTAGAAATAAGAATAGAGTTGAGAGTAAAAAATCACAAAAGAATCTGAAT GATAAAAATTCTAAGAAGAGAGTAGTTAGATTAATAAATACTAACTTTGGAAGAGAAGATTTATATATAACAGTGACATA TGAAGATGGATATTTGCCAGATGAAAAAACAGCAAGAAGAGATATGCAGAATTATATAAGAAGATTAAAGCATTATAGAA AGAAAAATGGAATGGATGAACTTAAATATATATATTCGATTGGATTTGAAGAAAATCCAGATAAAAGTAAAAAAATAAGA ATTCATCATCATTTGATTATAAATAAGATGGATAGAGATGTTGCAGAAGATTTATGGGGTAAGGGTAGAGCAGATTGTAA AAGATTGAAACCTAACGACTTTGAATTAACTGGAGTGGCAAAATATATAGCAAATCAAGGTCCGGAAAGATGGAGTGCAT CAAGAAATTTAAAAAAACCTAAAATTAGTACAAGCAGAACAGGTTTTACACGGAAAAGAGCATTAAATCTAATTAGTCAA CCTTATATTTTTAAAGAAATATTTGAAAAACAGTATCCTAATTTAATCTATAAAGATCATGAGTCATATTACAGTGAGGA ATCTCCAGGTGTATATATTCGAGTAATAATGAGAAAGCGAGAGTGA
Upstream 100 bases:
>100_bases ATCTCATATCAATTTAGTGTCAATTTTTTTTAAGCAGTTCAGGACTGCTATACGACCTTGTAATGGGTATTAATAAATCA ACAACACTAAAGAGGTATAT
Downstream 100 bases:
>100_bases TGAATTATGACAGAATCACAAGAACAAACTTGTTTATTCCAATGGGCTGGATATCAACAGGTAGAATTTGAAGAGTTAAA GTTATTACATCATGTTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKINKRDYEYENIYNRLLREETKEELIEDLRINQNYVYWRKKITSGKIVELEIYPVWKCKHDIPRNKNRVESKKSQKNLN DKNSKKRVVRLINTNFGREDLYITVTYEDGYLPDEKTARRDMQNYIRRLKHYRKKNGMDELKYIYSIGFEENPDKSKKIR IHHHLIINKMDRDVAEDLWGKGRADCKRLKPNDFELTGVAKYIANQGPERWSASRNLKKPKISTSRTGFTRKRALNLISQ PYIFKEIFEKQYPNLIYKDHESYYSEESPGVYIRVIMRKRE
Sequences:
>Translated_281_residues MKINKRDYEYENIYNRLLREETKEELIEDLRINQNYVYWRKKITSGKIVELEIYPVWKCKHDIPRNKNRVESKKSQKNLN DKNSKKRVVRLINTNFGREDLYITVTYEDGYLPDEKTARRDMQNYIRRLKHYRKKNGMDELKYIYSIGFEENPDKSKKIR IHHHLIINKMDRDVAEDLWGKGRADCKRLKPNDFELTGVAKYIANQGPERWSASRNLKKPKISTSRTGFTRKRALNLISQ PYIFKEIFEKQYPNLIYKDHESYYSEESPGVYIRVIMRKRE >Mature_281_residues MKINKRDYEYENIYNRLLREETKEELIEDLRINQNYVYWRKKITSGKIVELEIYPVWKCKHDIPRNKNRVESKKSQKNLN DKNSKKRVVRLINTNFGREDLYITVTYEDGYLPDEKTARRDMQNYIRRLKHYRKKNGMDELKYIYSIGFEENPDKSKKIR IHHHLIINKMDRDVAEDLWGKGRADCKRLKPNDFELTGVAKYIANQGPERWSASRNLKKPKISTSRTGFTRKRALNLISQ PYIFKEIFEKQYPNLIYKDHESYYSEESPGVYIRVIMRKRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34056; Mature: 34056
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINKRDYEYENIYNRLLREETKEELIEDLRINQNYVYWRKKITSGKIVELEIYPVWKCK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEECC HDIPRNKNRVESKKSQKNLNDKNSKKRVVRLINTNFGREDLYITVTYEDGYLPDEKTARR CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH DMQNYIRRLKHYRKKNGMDELKYIYSIGFEENPDKSKKIRIHHHLIINKMDRDVAEDLWG HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHC KGRADCKRLKPNDFELTGVAKYIANQGPERWSASRNLKKPKISTSRTGFTRKRALNLISQ CCCHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC PYIFKEIFEKQYPNLIYKDHESYYSEESPGVYIRVIMRKRE CHHHHHHHHHHCCCCEEECCHHHCCCCCCCEEEEEEEECCC >Mature Secondary Structure MKINKRDYEYENIYNRLLREETKEELIEDLRINQNYVYWRKKITSGKIVELEIYPVWKCK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEECC HDIPRNKNRVESKKSQKNLNDKNSKKRVVRLINTNFGREDLYITVTYEDGYLPDEKTARR CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH DMQNYIRRLKHYRKKNGMDELKYIYSIGFEENPDKSKKIRIHHHLIINKMDRDVAEDLWG HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHC KGRADCKRLKPNDFELTGVAKYIANQGPERWSASRNLKKPKISTSRTGFTRKRALNLISQ CCCHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC PYIFKEIFEKQYPNLIYKDHESYYSEESPGVYIRVIMRKRE CHHHHHHHHHHCCCCEEECCHHHCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA