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The map label for this gene is bioY [H]

Identifier: 187932900

GI number: 187932900

Start: 2911838

End: 2912350

Strand: Reverse

Name: bioY [H]

Synonym: CLL_A2836

Alternate gene names: 187932900

Gene position: 2912350-2911838 (Counterclockwise)

Preceding gene: 187933707

Following gene: 187935205

Centisome position: 76.63

GC content: 27.1

Gene sequence:

>513_bases
TTGAAGGATCAAATTATATGTGCAATATTTGCTGTTATTACAGCTATATGTGCTCAAATTTCTATTCCATTTTTTCAGAT
TCCATTTACAATGCAGGTCTTTGCAATTGTACTATCAGCAGTTATTCTTGGGTATAAAAAGGCATTTATATCGCAAATAA
TATACATATTGTTAGGAGCTGTTGGTTTACCCGTTTTTGCAGGTTTTAAAGGAGGAATTCAATCACTTATAGGTCCAACG
GGGGGATATATTACTTCATTTTTATTAATGGTATTAATTATTGGATATTTTTCAGAAAGATATGATGGAAATTATTTTAT
TATTGGCTTTTCAGGTATATTAGGAATTATAGTTTGTTATATCATAGGGACAGCTCAATTAGCATTTATTTTAAATATAA
CATTTTTAGATGCTTTAAAAATAGGTGTTTTACCTTTCGTTATTTTTGATTTAGCAAAGATAATTTTAGGAGTATTTTTA
GGAATTGATATAAAAAAGAGAATTTTCATATAA

Upstream 100 bases:

>100_bases
TGTGGTTGACAATTAAAAAGATGTAATTGTATAATATAAGAAATTCTTAAACAATATAAGAATTTTTTAAGGGGGGAAAG
TTATATCTAGTAAATTAATT

Downstream 100 bases:

>100_bases
TATAAACATAGAAGTAAAGTAGATATATTTAAGTGTGTAATGATATATAATATTGTATCTATGAACACGCATTAAAAATA
TATTAGAATACAAAGGTGAT

Product: BioY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKDQIICAIFAVITAICAQISIPFFQIPFTMQVFAIVLSAVILGYKKAFISQIIYILLGAVGLPVFAGFKGGIQSLIGPT
GGYITSFLLMVLIIGYFSERYDGNYFIIGFSGILGIIVCYIIGTAQLAFILNITFLDALKIGVLPFVIFDLAKIILGVFL
GIDIKKRIFI

Sequences:

>Translated_170_residues
MKDQIICAIFAVITAICAQISIPFFQIPFTMQVFAIVLSAVILGYKKAFISQIIYILLGAVGLPVFAGFKGGIQSLIGPT
GGYITSFLLMVLIIGYFSERYDGNYFIIGFSGILGIIVCYIIGTAQLAFILNITFLDALKIGVLPFVIFDLAKIILGVFL
GIDIKKRIFI
>Mature_170_residues
MKDQIICAIFAVITAICAQISIPFFQIPFTMQVFAIVLSAVILGYKKAFISQIIYILLGAVGLPVFAGFKGGIQSLIGPT
GGYITSFLLMVLIIGYFSERYDGNYFIIGFSGILGIIVCYIIGTAQLAFILNITFLDALKIGVLPFVIFDLAKIILGVFL
GIDIKKRIFI

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 18534; Mature: 18534

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDQIICAIFAVITAICAQISIPFFQIPFTMQVFAIVLSAVILGYKKAFISQIIYILLGA
CCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLPVFAGFKGGIQSLIGPTGGYITSFLLMVLIIGYFSERYDGNYFIIGFSGILGIIVCY
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
IIGTAQLAFILNITFLDALKIGVLPFVIFDLAKIILGVFLGIDIKKRIFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MKDQIICAIFAVITAICAQISIPFFQIPFTMQVFAIVLSAVILGYKKAFISQIIYILLGA
CCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLPVFAGFKGGIQSLIGPTGGYITSFLLMVLIIGYFSERYDGNYFIIGFSGILGIIVCY
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
IIGTAQLAFILNITFLDALKIGVLPFVIFDLAKIILGVFLGIDIKKRIFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]