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The map label for this gene is yidA [H]

Identifier: 187932824

GI number: 187932824

Start: 2997693

End: 2998496

Strand: Reverse

Name: yidA [H]

Synonym: CLL_A2915

Alternate gene names: 187932824

Gene position: 2998496-2997693 (Counterclockwise)

Preceding gene: 187932798

Following gene: 187934877

Centisome position: 78.9

GC content: 28.48

Gene sequence:

>804_bases
ATGTACAAATTAATAGCACTAGATATGGATGGAACATTACTTACAAGTGATAAAAAGGTTTCTGAAAGAAATAAAAAGGC
TATAAAAGCAGCTGAAGAAAAAGGCGTTAAGGTAGTTTTAGCTTCAGGAAGACCTAGTGAAGGGTTAAGACAATATTTAG
AAGAACTTGAATTATTAAAAGAGGATGATTACGTTCTTAGTTTTAATGGTGGAGTAGCTCAAAATGCAAAAAGTGGTGAA
ATAATATCAAGAACTGTTTTAAAAGGGAAAGATTTAAAATATATTAATAACATAGCTAAGAAATTAAATGTAAATATACA
TGCTTTTTCAGAAAAATTAGGATTGATAACACCTAAAATTAGCAAATATACAGAAGTTGAAGCAGAAATAAACGGAATTG
GTATAAGTATTGTAGATTTTGATAATATAGATGACACTGAAAATATAATAAAAATAATGATTATAGACCCAGAAGAAGTA
TTAGAAGAAGCAATTAAAAAATTACCTAAAGAAGTTTATGAAAAATATAATGTGTTAAGAAGCACACCTTTCTTCTTAGA
ATTTATGAACAATGAAGTTGATAAAGGTGAAGGTTTAAAAAGACTTGCAGAAACTTTAGGAATAAAACAAGAAGAGGTAA
TAGCAATGGGAGATGCAGGAAATGACTTATCAATGGTTAAATATGCAGGCCTTGGAGTTGCTATGGAAAATGGATTTGCT
GAAGTTAAAGAAAATGCACAATTTATAACTAAAAGCAATGATGAAGATGGAGTAGCTTATGCAATAGAAAAATTTGTTTT
ATAG

Upstream 100 bases:

>100_bases
AATATTTATATTATTAATGATAAATTAATTATGATAGAATAAAAGATGAGAATAATTTATATTAAAAATAGCATTACTTT
TAGATAAATGGAGGAAGAAT

Downstream 100 bases:

>100_bases
TCATGTTGATATTATAGTATAAAGCTTTATGAACTGAGTAATTTGTTTTATATGAGTGTTGATATATGCATAAGTAAAGT
GGGCTAAGTAATTGAATTTA

Product: phosphatase YidA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MYKLIALDMDGTLLTSDKKVSERNKKAIKAAEEKGVKVVLASGRPSEGLRQYLEELELLKEDDYVLSFNGGVAQNAKSGE
IISRTVLKGKDLKYINNIAKKLNVNIHAFSEKLGLITPKISKYTEVEAEINGIGISIVDFDNIDDTENIIKIMIIDPEEV
LEEAIKKLPKEVYEKYNVLRSTPFFLEFMNNEVDKGEGLKRLAETLGIKQEEVIAMGDAGNDLSMVKYAGLGVAMENGFA
EVKENAQFITKSNDEDGVAYAIEKFVL

Sequences:

>Translated_267_residues
MYKLIALDMDGTLLTSDKKVSERNKKAIKAAEEKGVKVVLASGRPSEGLRQYLEELELLKEDDYVLSFNGGVAQNAKSGE
IISRTVLKGKDLKYINNIAKKLNVNIHAFSEKLGLITPKISKYTEVEAEINGIGISIVDFDNIDDTENIIKIMIIDPEEV
LEEAIKKLPKEVYEKYNVLRSTPFFLEFMNNEVDKGEGLKRLAETLGIKQEEVIAMGDAGNDLSMVKYAGLGVAMENGFA
EVKENAQFITKSNDEDGVAYAIEKFVL
>Mature_267_residues
MYKLIALDMDGTLLTSDKKVSERNKKAIKAAEEKGVKVVLASGRPSEGLRQYLEELELLKEDDYVLSFNGGVAQNAKSGE
IISRTVLKGKDLKYINNIAKKLNVNIHAFSEKLGLITPKISKYTEVEAEINGIGISIVDFDNIDDTENIIKIMIIDPEEV
LEEAIKKLPKEVYEKYNVLRSTPFFLEFMNNEVDKGEGLKRLAETLGIKQEEVIAMGDAGNDLSMVKYAGLGVAMENGFA
EVKENAQFITKSNDEDGVAYAIEKFVL

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=267, Percent_Identity=44.5692883895131, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI87081790, Length=264, Percent_Identity=26.8939393939394, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI48994981, Length=281, Percent_Identity=25.9786476868327, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87081741, Length=247, Percent_Identity=25.1012145748988, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787043, Length=273, Percent_Identity=26.3736263736264, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29676; Mature: 29676

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLIALDMDGTLLTSDKKVSERNKKAIKAAEEKGVKVVLASGRPSEGLRQYLEELELLK
CEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHC
EDDYVLSFNGGVAQNAKSGEIISRTVLKGKDLKYINNIAKKLNVNIHAFSEKLGLITPKI
CCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCC
SKYTEVEAEINGIGISIVDFDNIDDTENIIKIMIIDPEEVLEEAIKKLPKEVYEKYNVLR
HHHHHHEEEECEEEEEEEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
STPFFLEFMNNEVDKGEGLKRLAETLGIKQEEVIAMGDAGNDLSMVKYAGLGVAMENGFA
CCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHCCCEEECCCHH
EVKENAQFITKSNDEDGVAYAIEKFVL
HHHCCCCEEECCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MYKLIALDMDGTLLTSDKKVSERNKKAIKAAEEKGVKVVLASGRPSEGLRQYLEELELLK
CEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHC
EDDYVLSFNGGVAQNAKSGEIISRTVLKGKDLKYINNIAKKLNVNIHAFSEKLGLITPKI
CCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCC
SKYTEVEAEINGIGISIVDFDNIDDTENIIKIMIIDPEEVLEEAIKKLPKEVYEKYNVLR
HHHHHHEEEECEEEEEEEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
STPFFLEFMNNEVDKGEGLKRLAETLGIKQEEVIAMGDAGNDLSMVKYAGLGVAMENGFA
CCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHCCCEEECCCHH
EVKENAQFITKSNDEDGVAYAIEKFVL
HHHCCCCEEECCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]