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The map label for this gene is ydiF [H]

Identifier: 187932745

GI number: 187932745

Start: 775994

End: 777919

Strand: Reverse

Name: ydiF [H]

Synonym: CLL_A0764

Alternate gene names: 187932745

Gene position: 777919-775994 (Counterclockwise)

Preceding gene: 187934106

Following gene: 187934055

Centisome position: 20.47

GC content: 26.12

Gene sequence:

>1926_bases
ATGATTGTCTTAAGTTGTAAAGATATAAGTAAAAGTTATGGAATAGATGATATTTTAAAGGAAGTAACTTTTTCTGTTAA
TGATGGAGATAAGGTTGGTATAATTGGATCAAATGGAGAAGGTAAATCTACTCTATTCAAAATACTTTCTAAAGAAATCC
TTCAAGATACAGGTGATATTTATATAGATAAAAATAAATCTATAGGCTATTTATCTCAACATTTAAACTTAAATTCCGAA
TTTACTCTTTATGATGAAATGTTGACAGTATTTAATGAGCTTATACAACTAGAAAATAAAATTTCTAATTTACAAATAAA
AATGGGTGAACCTTATGATGAGAAAAATGCTGCTTATCATGAAAAGATAATAAAAGACTATACTACTGCTCAAGATTTAT
ATGAAAACAGAGGTGGATATACATATAAGGGTGAAATATCTCGTATAGTTAAGGGTTTAGGATTTAATGAAAATGATTTT
AATAAAGTTATTTCAACACTTAGTGGTGGACAGAAGACTAGAGTAGCTTTATGTAAGCTATTGCTTTTAAAACCTGATAT
ATTACTACTAGATGAACCTACTAATCATTTAGATTTGGATGCAATTGAATGGCTTGAAGAATACTTAAAAAGCTATAAAG
GAACAGTTCTTATAATCTCACATGATAGATATTTCTTAGATTCTGTTACTAATATAACCTTTCAAGTTATAAATGGTCAT
GTTAATTGCTATAATGCATCATATACTAAATATTTAGAATTAAAAGAAAAAGATTATGAAAGTAAATTAAAAGCTTATAA
TATTCAACAAGCTGAAATTAAAAGACAGGAAGCTATTATAGAAAAATTCAGATCATTTAATAGGGAAAAAAGTATTAAAG
CTGCTGAAAGCAGAGAAAAAGCCCTTGATAGAATTGACCTATTGCATGCTCCTGATGTTGAAAAATCTGCTTCTAAAATA
AAATTTGAGACATCTGTAAAAAGTGGATTTGACGTATTACATATTGAAAACTTATCTAAATCTTATGGTGAGAAAAAATT
ATTTTCTAATCTTTCAGTTGATCTAAAACGTGGAGAAAAAATTGCTTTAATCGGTGAAAATGGTAGAGGTAAAACAACTT
TATTTAATATAATAATGGATAAAGTTAAAAGTGATGGTGGCATTAAAGTTCTAGGTACAAATGTTAATGTTGGATATTAC
GATCAAGAACAATCAAATCTTAATCTTGATAAAACAATAATAGATGAAGTTTGGGATGATTTTCCTGAACTAACTACCAC
ACAAATTAGAAATGTTCTTGCTTCTTTTTTATTTACTGGAGATGATGTTTTTAAAAAAATTGATAAACTAAGTGGTGGAG
AAAAGTGTAGAATTAATTTATTAAAACTTATTTTATCAAAAGCTAATTTATTATTATTAGATGAACCTACTAATCACTTA
GACATCCCATCTAGAGAAGCTCTAGAAGATGCTATTCTAAGTTATGACGGTTCTTTACTAGTAATATCTCATGATAGATA
TTTTTTAAATAAAGTTATAAATAGAATCTTAGAATTAACTGAAAATGGAGTTGTAAATTATTTAGGTAATTATAGCTATT
ATACAGAAAAGAAAAAAAATCCTTTGAGATTTGAAAATTATGATGAACAGGATTCATCAAAAACAAAGACTCAATTAAAT
ACAGAAAAAAAGAAAAAAAAGGCTTTAGATAAAGAGGTCAAGGCCCTTCAAAATAAAATAAAATATCTTGAAGATACTAT
AAATAAAAATGAAGAAGAGTTATTAATGCTTCAAGAAGATTTGTGTAAAGAAGAAATTTATTCTAATCCATCTGAAAGTG
AAAGAGTTAATAAAGAAATTAAAGCTAAAGAAAGCTTAATTGAAGAACTTTATGCACAATGGGAAGAATTAAATGAATCA
AACTAA

Upstream 100 bases:

>100_bases
TCCTCCAAAGATTATTCCTTAAATTGATATACCTATTATAAAATAGTATAATTATATAATATACATTTAATTATAACAAT
AAAACATTGGAGGATAAATA

Downstream 100 bases:

>100_bases
AAGACCATATTTTTAATATATATTCATAGATGTCATTGAACTTAACTTTTAAATCTATTAAACAAAAATTAAAATTACAT
TTTAATAGTTTAATTTTGTA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MIVLSCKDISKSYGIDDILKEVTFSVNDGDKVGIIGSNGEGKSTLFKILSKEILQDTGDIYIDKNKSIGYLSQHLNLNSE
FTLYDEMLTVFNELIQLENKISNLQIKMGEPYDEKNAAYHEKIIKDYTTAQDLYENRGGYTYKGEISRIVKGLGFNENDF
NKVISTLSGGQKTRVALCKLLLLKPDILLLDEPTNHLDLDAIEWLEEYLKSYKGTVLIISHDRYFLDSVTNITFQVINGH
VNCYNASYTKYLELKEKDYESKLKAYNIQQAEIKRQEAIIEKFRSFNREKSIKAAESREKALDRIDLLHAPDVEKSASKI
KFETSVKSGFDVLHIENLSKSYGEKKLFSNLSVDLKRGEKIALIGENGRGKTTLFNIIMDKVKSDGGIKVLGTNVNVGYY
DQEQSNLNLDKTIIDEVWDDFPELTTTQIRNVLASFLFTGDDVFKKIDKLSGGEKCRINLLKLILSKANLLLLDEPTNHL
DIPSREALEDAILSYDGSLLVISHDRYFLNKVINRILELTENGVVNYLGNYSYYTEKKKNPLRFENYDEQDSSKTKTQLN
TEKKKKKALDKEVKALQNKIKYLEDTINKNEEELLMLQEDLCKEEIYSNPSESERVNKEIKAKESLIEELYAQWEELNES
N

Sequences:

>Translated_641_residues
MIVLSCKDISKSYGIDDILKEVTFSVNDGDKVGIIGSNGEGKSTLFKILSKEILQDTGDIYIDKNKSIGYLSQHLNLNSE
FTLYDEMLTVFNELIQLENKISNLQIKMGEPYDEKNAAYHEKIIKDYTTAQDLYENRGGYTYKGEISRIVKGLGFNENDF
NKVISTLSGGQKTRVALCKLLLLKPDILLLDEPTNHLDLDAIEWLEEYLKSYKGTVLIISHDRYFLDSVTNITFQVINGH
VNCYNASYTKYLELKEKDYESKLKAYNIQQAEIKRQEAIIEKFRSFNREKSIKAAESREKALDRIDLLHAPDVEKSASKI
KFETSVKSGFDVLHIENLSKSYGEKKLFSNLSVDLKRGEKIALIGENGRGKTTLFNIIMDKVKSDGGIKVLGTNVNVGYY
DQEQSNLNLDKTIIDEVWDDFPELTTTQIRNVLASFLFTGDDVFKKIDKLSGGEKCRINLLKLILSKANLLLLDEPTNHL
DIPSREALEDAILSYDGSLLVISHDRYFLNKVINRILELTENGVVNYLGNYSYYTEKKKNPLRFENYDEQDSSKTKTQLN
TEKKKKKALDKEVKALQNKIKYLEDTINKNEEELLMLQEDLCKEEIYSNPSESERVNKEIKAKESLIEELYAQWEELNES
N
>Mature_641_residues
MIVLSCKDISKSYGIDDILKEVTFSVNDGDKVGIIGSNGEGKSTLFKILSKEILQDTGDIYIDKNKSIGYLSQHLNLNSE
FTLYDEMLTVFNELIQLENKISNLQIKMGEPYDEKNAAYHEKIIKDYTTAQDLYENRGGYTYKGEISRIVKGLGFNENDF
NKVISTLSGGQKTRVALCKLLLLKPDILLLDEPTNHLDLDAIEWLEEYLKSYKGTVLIISHDRYFLDSVTNITFQVINGH
VNCYNASYTKYLELKEKDYESKLKAYNIQQAEIKRQEAIIEKFRSFNREKSIKAAESREKALDRIDLLHAPDVEKSASKI
KFETSVKSGFDVLHIENLSKSYGEKKLFSNLSVDLKRGEKIALIGENGRGKTTLFNIIMDKVKSDGGIKVLGTNVNVGYY
DQEQSNLNLDKTIIDEVWDDFPELTTTQIRNVLASFLFTGDDVFKKIDKLSGGEKCRINLLKLILSKANLLLLDEPTNHL
DIPSREALEDAILSYDGSLLVISHDRYFLNKVINRILELTENGVVNYLGNYSYYTEKKKNPLRFENYDEQDSSKTKTQLN
TEKKKKKALDKEVKALQNKIKYLEDTINKNEEELLMLQEDLCKEEIYSNPSESERVNKEIKAKESLIEELYAQWEELNES
N

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=543, Percent_Identity=28.9134438305709, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI27881506, Length=543, Percent_Identity=28.7292817679558, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI148612853, Length=542, Percent_Identity=27.3062730627306, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI10947135, Length=523, Percent_Identity=27.3422562141491, Blast_Score=185, Evalue=1e-46,
Organism=Homo sapiens, GI69354671, Length=523, Percent_Identity=27.3422562141491, Blast_Score=185, Evalue=1e-46,
Organism=Escherichia coli, GI2367384, Length=533, Percent_Identity=34.7091932457786, Blast_Score=305, Evalue=8e-84,
Organism=Escherichia coli, GI1789751, Length=646, Percent_Identity=29.4117647058824, Blast_Score=299, Evalue=4e-82,
Organism=Escherichia coli, GI1787041, Length=546, Percent_Identity=32.7838827838828, Blast_Score=285, Evalue=6e-78,
Organism=Escherichia coli, GI1787182, Length=651, Percent_Identity=29.8003072196621, Blast_Score=267, Evalue=2e-72,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=30.9278350515464, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788225, Length=282, Percent_Identity=25.531914893617, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1789593, Length=260, Percent_Identity=24.6153846153846, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=26.271186440678, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=26.8867924528302, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1788506, Length=255, Percent_Identity=22.7450980392157, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI87081709, Length=197, Percent_Identity=24.3654822335025, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI48995001, Length=284, Percent_Identity=23.943661971831, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=528, Percent_Identity=28.030303030303, Blast_Score=218, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17553372, Length=537, Percent_Identity=27.9329608938547, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17559834, Length=529, Percent_Identity=26.8431001890359, Blast_Score=201, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6321121, Length=531, Percent_Identity=30.5084745762712, Blast_Score=225, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=31.0018903591682, Blast_Score=222, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6325030, Length=396, Percent_Identity=25.2525252525253, Blast_Score=103, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=411, Percent_Identity=24.0875912408759, Blast_Score=98, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6323278, Length=239, Percent_Identity=29.2887029288703, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=28.9772727272727, Blast_Score=234, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24642252, Length=547, Percent_Identity=29.2504570383912, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI18859989, Length=547, Percent_Identity=29.2504570383912, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=26.2569832402235, Blast_Score=194, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73479; Mature: 73479

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLSCKDISKSYGIDDILKEVTFSVNDGDKVGIIGSNGEGKSTLFKILSKEILQDTGDI
CEEEEECCCHHHCCHHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCE
YIDKNKSIGYLSQHLNLNSEFTLYDEMLTVFNELIQLENKISNLQIKMGEPYDEKNAAYH
EEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
EKIIKDYTTAQDLYENRGGYTYKGEISRIVKGLGFNENDFNKVISTLSGGQKTRVALCKL
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
LLLKPDILLLDEPTNHLDLDAIEWLEEYLKSYKGTVLIISHDRYFLDSVTNITFQVINGH
HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHEEEEEEECE
VNCYNASYTKYLELKEKDYESKLKAYNIQQAEIKRQEAIIEKFRSFNREKSIKAAESREK
EEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALDRIDLLHAPDVEKSASKIKFETSVKSGFDVLHIENLSKSYGEKKLFSNLSVDLKRGEK
HHHHHHHCCCCCCCHHHHHEEEEEHHCCCCCEEEEHHHHHHHCHHHHHHCCCCEECCCCE
IALIGENGRGKTTLFNIIMDKVKSDGGIKVLGTNVNVGYYDQEQSNLNLDKTIIDEVWDD
EEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHC
FPELTTTQIRNVLASFLFTGDDVFKKIDKLSGGEKCRINLLKLILSKANLLLLDEPTNHL
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
DIPSREALEDAILSYDGSLLVISHDRYFLNKVINRILELTENGVVNYLGNYSYYTEKKKN
CCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCC
PLRFENYDEQDSSKTKTQLNTEKKKKKALDKEVKALQNKIKYLEDTINKNEEELLMLQED
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LCKEEIYSNPSESERVNKEIKAKESLIEELYAQWEELNESN
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIVLSCKDISKSYGIDDILKEVTFSVNDGDKVGIIGSNGEGKSTLFKILSKEILQDTGDI
CEEEEECCCHHHCCHHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCE
YIDKNKSIGYLSQHLNLNSEFTLYDEMLTVFNELIQLENKISNLQIKMGEPYDEKNAAYH
EEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
EKIIKDYTTAQDLYENRGGYTYKGEISRIVKGLGFNENDFNKVISTLSGGQKTRVALCKL
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
LLLKPDILLLDEPTNHLDLDAIEWLEEYLKSYKGTVLIISHDRYFLDSVTNITFQVINGH
HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHEEEEEEECE
VNCYNASYTKYLELKEKDYESKLKAYNIQQAEIKRQEAIIEKFRSFNREKSIKAAESREK
EEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALDRIDLLHAPDVEKSASKIKFETSVKSGFDVLHIENLSKSYGEKKLFSNLSVDLKRGEK
HHHHHHHCCCCCCCHHHHHEEEEEHHCCCCCEEEEHHHHHHHCHHHHHHCCCCEECCCCE
IALIGENGRGKTTLFNIIMDKVKSDGGIKVLGTNVNVGYYDQEQSNLNLDKTIIDEVWDD
EEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHC
FPELTTTQIRNVLASFLFTGDDVFKKIDKLSGGEKCRINLLKLILSKANLLLLDEPTNHL
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
DIPSREALEDAILSYDGSLLVISHDRYFLNKVINRILELTENGVVNYLGNYSYYTEKKKN
CCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCC
PLRFENYDEQDSSKTKTQLNTEKKKKKALDKEVKALQNKIKYLEDTINKNEEELLMLQED
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LCKEEIYSNPSESERVNKEIKAKESLIEELYAQWEELNESN
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]