| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932673
Identifier: 187932673
GI number: 187932673
Start: 2024098
End: 2024877
Strand: Reverse
Name: 187932673
Synonym: CLL_A1949
Alternate gene names: NA
Gene position: 2024877-2024098 (Counterclockwise)
Preceding gene: 187935482
Following gene: 187933342
Centisome position: 53.28
GC content: 28.85
Gene sequence:
>780_bases ATGGATAAAAAAATTTTAGAAGTATCTCAAATAAAATTAAGAGGTATAAAAGAAGTGGAAGGAATGAAATTTCACGATAT TGAAGGTGGATTTGGAGAAAGTAAAAAAGCAATGTTAGCTAAAGAAATTGCTGAAATACACAGGAGAGAAGTTAAAAAGG TAAATGAATTAATAAATAACAATAGAAAAAGATTTAAAGACAATGTGGACATTATAGATTTAAAAACAGGTCTTTCAAAA AGACTTGTTTTAGAAATGGGATTCACTAATGCTCAATACGGAAATGCAAATAATATTTACTTATTATCAGAAAGAGGATA TTCAAAACTCCTAAAAATCTTAGAAGATGATGTTGCATGGGAGCAATACGAAAAACTTGTAGATGGATATTTCAATATGA GGGCAGAATTTCCTAAGATGTCAAAGGAACTTAAAGCAATATTTGCAATCGATGAAAGAACAGTTGAATTAGACAGCAGA ATTACCAAATTAGAAAATAATACAACAATAGATTATTCACAACAGGAAGAATTAAGAACTCTTGGAACTAAAAAAGTAGT TGCAATTTTAGGTGGAACAGATGCACCAGCATATAAAGAACTTAATAAGAAGGTATTCAGCAGTTTTTGGAGAGATTATA AAAGAAAACTTGAAGTTAATTCATATAAGAATACATTAGTAAAGGATTTTGAAACAGGAAAACAAGCTATCATAAATTGG TGTCCAAGCAAGGAAGTATATTTTATGATTAGAGGTTGTAATGCTCAAATGAGAATGTAA
Upstream 100 bases:
>100_bases AAAGACAAGCACATCTAACTTAAAAAGCAATTACATTCAGTAATTTTCAGTTTAAGAGATTAGGGAAATAAATTACAAGT TAATTTAAGGAGGAGAATAT
Downstream 100 bases:
>100_bases GATAAGAGACTTTATATTAAATCTTTTATCTTAACATAATAACAAAATTGTAAGGAGGAATTAATAAATTTATGATTAAA CAAATTATTCCATGCACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Protein; Antirepressor; Xin-Antitoxin System Toxin Component Bro Family; Anti-Repressor
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINNNRKRFKDNVDIIDLKTGLSK RLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAWEQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSR ITKLENNTTIDYSQQEELRTLGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW CPSKEVYFMIRGCNAQMRM
Sequences:
>Translated_259_residues MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINNNRKRFKDNVDIIDLKTGLSK RLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAWEQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSR ITKLENNTTIDYSQQEELRTLGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW CPSKEVYFMIRGCNAQMRM >Mature_259_residues MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINNNRKRFKDNVDIIDLKTGLSK RLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAWEQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSR ITKLENNTTIDYSQQEELRTLGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW CPSKEVYFMIRGCNAQMRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30148; Mature: 30148
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINN CCCCHHHHHHHHHCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NRKRFKDNVDIIDLKTGLSKRLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAW CHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH EQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSRITKLENNTTIDYSQQEELRT HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCHHHHHHH LGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW HCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC CPSKEVYFMIRGCNAQMRM CCCCCEEEEEECCCCCCCC >Mature Secondary Structure MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINN CCCCHHHHHHHHHCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NRKRFKDNVDIIDLKTGLSKRLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAW CHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH EQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSRITKLENNTTIDYSQQEELRT HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCHHHHHHH LGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW HCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC CPSKEVYFMIRGCNAQMRM CCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA