Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187932673

Identifier: 187932673

GI number: 187932673

Start: 2024098

End: 2024877

Strand: Reverse

Name: 187932673

Synonym: CLL_A1949

Alternate gene names: NA

Gene position: 2024877-2024098 (Counterclockwise)

Preceding gene: 187935482

Following gene: 187933342

Centisome position: 53.28

GC content: 28.85

Gene sequence:

>780_bases
ATGGATAAAAAAATTTTAGAAGTATCTCAAATAAAATTAAGAGGTATAAAAGAAGTGGAAGGAATGAAATTTCACGATAT
TGAAGGTGGATTTGGAGAAAGTAAAAAAGCAATGTTAGCTAAAGAAATTGCTGAAATACACAGGAGAGAAGTTAAAAAGG
TAAATGAATTAATAAATAACAATAGAAAAAGATTTAAAGACAATGTGGACATTATAGATTTAAAAACAGGTCTTTCAAAA
AGACTTGTTTTAGAAATGGGATTCACTAATGCTCAATACGGAAATGCAAATAATATTTACTTATTATCAGAAAGAGGATA
TTCAAAACTCCTAAAAATCTTAGAAGATGATGTTGCATGGGAGCAATACGAAAAACTTGTAGATGGATATTTCAATATGA
GGGCAGAATTTCCTAAGATGTCAAAGGAACTTAAAGCAATATTTGCAATCGATGAAAGAACAGTTGAATTAGACAGCAGA
ATTACCAAATTAGAAAATAATACAACAATAGATTATTCACAACAGGAAGAATTAAGAACTCTTGGAACTAAAAAAGTAGT
TGCAATTTTAGGTGGAACAGATGCACCAGCATATAAAGAACTTAATAAGAAGGTATTCAGCAGTTTTTGGAGAGATTATA
AAAGAAAACTTGAAGTTAATTCATATAAGAATACATTAGTAAAGGATTTTGAAACAGGAAAACAAGCTATCATAAATTGG
TGTCCAAGCAAGGAAGTATATTTTATGATTAGAGGTTGTAATGCTCAAATGAGAATGTAA

Upstream 100 bases:

>100_bases
AAAGACAAGCACATCTAACTTAAAAAGCAATTACATTCAGTAATTTTCAGTTTAAGAGATTAGGGAAATAAATTACAAGT
TAATTTAAGGAGGAGAATAT

Downstream 100 bases:

>100_bases
GATAAGAGACTTTATATTAAATCTTTTATCTTAACATAATAACAAAATTGTAAGGAGGAATTAATAAATTTATGATTAAA
CAAATTATTCCATGCACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Protein; Antirepressor; Xin-Antitoxin System Toxin Component Bro Family; Anti-Repressor

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINNNRKRFKDNVDIIDLKTGLSK
RLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAWEQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSR
ITKLENNTTIDYSQQEELRTLGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW
CPSKEVYFMIRGCNAQMRM

Sequences:

>Translated_259_residues
MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINNNRKRFKDNVDIIDLKTGLSK
RLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAWEQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSR
ITKLENNTTIDYSQQEELRTLGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW
CPSKEVYFMIRGCNAQMRM
>Mature_259_residues
MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINNNRKRFKDNVDIIDLKTGLSK
RLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAWEQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSR
ITKLENNTTIDYSQQEELRTLGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW
CPSKEVYFMIRGCNAQMRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30148; Mature: 30148

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINN
CCCCHHHHHHHHHCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRKRFKDNVDIIDLKTGLSKRLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAW
CHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
EQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSRITKLENNTTIDYSQQEELRT
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCHHHHHHH
LGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW
HCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
CPSKEVYFMIRGCNAQMRM
CCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MDKKILEVSQIKLRGIKEVEGMKFHDIEGGFGESKKAMLAKEIAEIHRREVKKVNELINN
CCCCHHHHHHHHHCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRKRFKDNVDIIDLKTGLSKRLVLEMGFTNAQYGNANNIYLLSERGYSKLLKILEDDVAW
CHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
EQYEKLVDGYFNMRAEFPKMSKELKAIFAIDERTVELDSRITKLENNTTIDYSQQEELRT
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCHHHHHHH
LGTKKVVAILGGTDAPAYKELNKKVFSSFWRDYKRKLEVNSYKNTLVKDFETGKQAIINW
HCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
CPSKEVYFMIRGCNAQMRM
CCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA