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The map label for this gene is ohrR [H]

Identifier: 187932597

GI number: 187932597

Start: 3729480

End: 3729911

Strand: Reverse

Name: ohrR [H]

Synonym: CLL_A3521

Alternate gene names: 187932597

Gene position: 3729911-3729480 (Counterclockwise)

Preceding gene: 187934945

Following gene: 187935665

Centisome position: 98.15

GC content: 25.23

Gene sequence:

>432_bases
ATGAGTAAATATGATTGCATTAAATTAGAAAATCAAGTATGTTTTTCTTTATATGCAGCTTCTAGAGAAATAATTAAATT
ATATAAGCCAGTTTTAGATAAATTTAATCTTACATATACTCAGTATGTTGCAATGCTTGTTTTATGGGAAGATGAAAAAA
TTACAGTAAAAGGCATTGGTAAAAGGTTGCATTTAGATTCTGGTACATTAACACCGTTATTAAAAAAATTAGAATTTATG
GGATTGGTTGATAGATATAGAGATAAAAATGATGATAGAGTAGTTATTGTTGAATTAACTGATAAAGGAAGACAGTTGAA
AGAGAAGATAGTTACTGTTCCAAATGATATGTGTTGTAAAATAAATATATCTCAAGAACAAGCTAAATCTTTAAAAGAAA
ATTTAGACAATTTATTAAATAGTCTTGAATAG

Upstream 100 bases:

>100_bases
TTCATATAATTATAATATTATTTTAATAGATTTAATTTGTTAAAATTTAATTTTGATATTTTAATTTGAAATTTAGATAT
ATTAATGATAGGAGAATTTT

Downstream 100 bases:

>100_bases
TGCAGTGGGTGGATATTTCTAAAAATAAAATTTATTTTGGAAATATCTTTTTTTGTACAGAAAATTATAGTTTTTTTGTT
TTATTAAGTTTATTGATAGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSKYDCIKLENQVCFSLYAASREIIKLYKPVLDKFNLTYTQYVAMLVLWEDEKITVKGIGKRLHLDSGTLTPLLKKLEFM
GLVDRYRDKNDDRVVIVELTDKGRQLKEKIVTVPNDMCCKINISQEQAKSLKENLDNLLNSLE

Sequences:

>Translated_143_residues
MSKYDCIKLENQVCFSLYAASREIIKLYKPVLDKFNLTYTQYVAMLVLWEDEKITVKGIGKRLHLDSGTLTPLLKKLEFM
GLVDRYRDKNDDRVVIVELTDKGRQLKEKIVTVPNDMCCKINISQEQAKSLKENLDNLLNSLE
>Mature_142_residues
SKYDCIKLENQVCFSLYAASREIIKLYKPVLDKFNLTYTQYVAMLVLWEDEKITVKGIGKRLHLDSGTLTPLLKKLEFMG
LVDRYRDKNDDRVVIVELTDKGRQLKEKIVTVPNDMCCKINISQEQAKSLKENLDNLLNSLE

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16590; Mature: 16458

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYDCIKLENQVCFSLYAASREIIKLYKPVLDKFNLTYTQYVAMLVLWEDEKITVKGIG
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCEEEEEECC
KRLHLDSGTLTPLLKKLEFMGLVDRYRDKNDDRVVIVELTDKGRQLKEKIVTVPNDMCCK
CEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEE
INISQEQAKSLKENLDNLLNSLE
EECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKYDCIKLENQVCFSLYAASREIIKLYKPVLDKFNLTYTQYVAMLVLWEDEKITVKGIG
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCEEEEEECC
KRLHLDSGTLTPLLKKLEFMGLVDRYRDKNDDRVVIVELTDKGRQLKEKIVTVPNDMCCK
CEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEE
INISQEQAKSLKENLDNLLNSLE
EECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]