| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932570
Identifier: 187932570
GI number: 187932570
Start: 2340906
End: 2341487
Strand: Reverse
Name: 187932570
Synonym: CLL_A2252
Alternate gene names: NA
Gene position: 2341487-2340906 (Counterclockwise)
Preceding gene: 187935702
Following gene: 187933297
Centisome position: 61.61
GC content: 34.54
Gene sequence:
>582_bases ATGTCAGTAGATGGAAAAGAAAAGATTGTTTTAGGATCAGGTAAATTATTCGTTTTGGAATATGATTCAGTGACAGGAAT ACCAGAAGATACAGTTGTGGAAGCAGAAATAAACCAAGTAGGGTTAATTCAAGGAGGTGCTACGCTTGAATATAAGCCTA CTTTTTATACAGCGAAAGATGATTTAGGTCTAAAAAGCAAAACTGTTATGACAGAAGAAGAAGCAACTCTTAAAAGCGGT ATTATGACATGGTGCGGTAAGACATTAACAAAACTTTGCAGTACTGCAAGAGTTACAGAAGATAAAGTTAAAGGTACAAG AACTGTAAAAATTGGTGGAGCAGGCAATCAGGATGGAAAAGACTATTTAATAAGATTTCTACATGAAGATAAAGCAGACG GAGATATACGAGTTAGTGTCGTTGGTAAGAATGAAGCTGGATTTAGTTTTAGTTTTGCAAAAGATAAAGAAACCGTAATT GATGCAGAATTTAAAGCACAACCACATGATAGTGAAGGAACTTTAATTAACTACAAGGAAGACATTCCAGTAGTTACAGA AAAACAGAAGGGAGAGATTTAA
Upstream 100 bases:
>100_bases AATCAATAAATTATTCAAAAAGTCGTGTGTGGTTAGATTCTGAAAAGATGTTTCAAACCTCATACGACTTTAATTTATAT GAAAAAATGGAGGAATAAAT
Downstream 100 bases:
>100_bases AAATGTTTGATGTAAAAAGTGTAAACGCAAGGTATTTTGAAGTTAAATTAAGTATTACGAATGAAGTTGGAGAGGTTGAG AACAACATAGATGTTAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSVDGKEKIVLGSGKLFVLEYDSVTGIPEDTVVEAEINQVGLIQGGATLEYKPTFYTAKDDLGLKSKTVMTEEEATLKSG IMTWCGKTLTKLCSTARVTEDKVKGTRTVKIGGAGNQDGKDYLIRFLHEDKADGDIRVSVVGKNEAGFSFSFAKDKETVI DAEFKAQPHDSEGTLINYKEDIPVVTEKQKGEI
Sequences:
>Translated_193_residues MSVDGKEKIVLGSGKLFVLEYDSVTGIPEDTVVEAEINQVGLIQGGATLEYKPTFYTAKDDLGLKSKTVMTEEEATLKSG IMTWCGKTLTKLCSTARVTEDKVKGTRTVKIGGAGNQDGKDYLIRFLHEDKADGDIRVSVVGKNEAGFSFSFAKDKETVI DAEFKAQPHDSEGTLINYKEDIPVVTEKQKGEI >Mature_192_residues SVDGKEKIVLGSGKLFVLEYDSVTGIPEDTVVEAEINQVGLIQGGATLEYKPTFYTAKDDLGLKSKTVMTEEEATLKSGI MTWCGKTLTKLCSTARVTEDKVKGTRTVKIGGAGNQDGKDYLIRFLHEDKADGDIRVSVVGKNEAGFSFSFAKDKETVID AEFKAQPHDSEGTLINYKEDIPVVTEKQKGEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21033; Mature: 20902
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDGKEKIVLGSGKLFVLEYDSVTGIPEDTVVEAEINQVGLIQGGATLEYKPTFYTAKD CCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCEEEEEECCCEEEECCCEEECCC DLGLKSKTVMTEEEATLKSGIMTWCGKTLTKLCSTARVTEDKVKGTRTVKIGGAGNQDGK CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEECCCCCCCCH DYLIRFLHEDKADGDIRVSVVGKNEAGFSFSFAKDKETVIDAEFKAQPHDSEGTLINYKE HHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEECC DIPVVTEKQKGEI CCCEEECCCCCCC >Mature Secondary Structure SVDGKEKIVLGSGKLFVLEYDSVTGIPEDTVVEAEINQVGLIQGGATLEYKPTFYTAKD CCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCEEEEEECCCEEEECCCEEECCC DLGLKSKTVMTEEEATLKSGIMTWCGKTLTKLCSTARVTEDKVKGTRTVKIGGAGNQDGK CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEECCCCCCCCH DYLIRFLHEDKADGDIRVSVVGKNEAGFSFSFAKDKETVIDAEFKAQPHDSEGTLINYKE HHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEECC DIPVVTEKQKGEI CCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA