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The map label for this gene is yccM [C]

Identifier: 187932467

GI number: 187932467

Start: 2889773

End: 2890429

Strand: Reverse

Name: yccM [C]

Synonym: CLL_A2809

Alternate gene names: 187932467

Gene position: 2890429-2889773 (Counterclockwise)

Preceding gene: 187934707

Following gene: 187932876

Centisome position: 76.06

GC content: 27.55

Gene sequence:

>657_bases
ATGAATAAGTTTTTAGTATTATGGAAAAAGTATTCATTTGTAGCATTAATGATGTTTATTTTACTAGGATTATTTGATGC
AAGAATAGCATTATTAGCCATTATATGTATGGTTGCACCTATAATTGTTTCTTTATTTAAAGGGAGATTTTGGTGTGGTA
ATTTATGTCCGAGAGGAAGTTTCTATGATAATGTAGTTTCTAAATTTAGCAACAAAAGAAAAGTACCTAAATTTTTAAAA
TCTTATTATTTTAGAGCTATAGTTTTTGTAGGTATGATGACTATGTTTGGTTTAGGAATAAAGCAAAACTTAGGAAATTT
ATATGGCATTGGCATGGTATTTTATAGAATGATTGTTGTAACGACTTTAATTGGAATAGTATTATCTTTATTTTATAATC
ATAGAACCTGGTGTAATTTCTGTCCAATGGGAAGTGTAGCATCAATAATATCAAAATTTAAAAAGAGTAAAAAGGTACTA
CAAGTATCATCTTCATGTGTATCATGTAAAATGTGTGAAAAAAAATGTCCTTTAGGAATAGTTCCTTATGAATATAAGGG
GGATATCTTAAGTCATCCTGATTGTATACAATGTGGACAATGTGTATCAGTATGTCCTAAAAATGCAGTTGGATATGATA
AAATCACATTAAAATAG

Upstream 100 bases:

>100_bases
ATTTTTCAAAGTAACAAAGTCACAAAAGTATATGAGTCTATATAGTAATATAAACATTGTAATTTACAAAGTAAAAATAT
TTAGTTTGGAGTGTGGTTTG

Downstream 100 bases:

>100_bases
AAAAATATAATTAAAATAAAAGGTTAAAATAAACTATACGTAAGTTAAGTTTATTTTAACCTTATTTTTGAGTGTTTAAT
AAAAAATATTATTATTTTAT

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNKFLVLWKKYSFVALMMFILLGLFDARIALLAIICMVAPIIVSLFKGRFWCGNLCPRGSFYDNVVSKFSNKRKVPKFLK
SYYFRAIVFVGMMTMFGLGIKQNLGNLYGIGMVFYRMIVVTTLIGIVLSLFYNHRTWCNFCPMGSVASIISKFKKSKKVL
QVSSSCVSCKMCEKKCPLGIVPYEYKGDILSHPDCIQCGQCVSVCPKNAVGYDKITLK

Sequences:

>Translated_218_residues
MNKFLVLWKKYSFVALMMFILLGLFDARIALLAIICMVAPIIVSLFKGRFWCGNLCPRGSFYDNVVSKFSNKRKVPKFLK
SYYFRAIVFVGMMTMFGLGIKQNLGNLYGIGMVFYRMIVVTTLIGIVLSLFYNHRTWCNFCPMGSVASIISKFKKSKKVL
QVSSSCVSCKMCEKKCPLGIVPYEYKGDILSHPDCIQCGQCVSVCPKNAVGYDKITLK
>Mature_218_residues
MNKFLVLWKKYSFVALMMFILLGLFDARIALLAIICMVAPIIVSLFKGRFWCGNLCPRGSFYDNVVSKFSNKRKVPKFLK
SYYFRAIVFVGMMTMFGLGIKQNLGNLYGIGMVFYRMIVVTTLIGIVLSLFYNHRTWCNFCPMGSVASIISKFKKSKKVL
QVSSSCVSCKMCEKKCPLGIVPYEYKGDILSHPDCIQCGQCVSVCPKNAVGYDKITLK

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24647; Mature: 24647

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFLVLWKKYSFVALMMFILLGLFDARIALLAIICMVAPIIVSLFKGRFWCGNLCPRGS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FYDNVVSKFSNKRKVPKFLKSYYFRAIVFVGMMTMFGLGIKQNLGNLYGIGMVFYRMIVV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TTLIGIVLSLFYNHRTWCNFCPMGSVASIISKFKKSKKVLQVSSSCVSCKMCEKKCPLGI
HHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VPYEYKGDILSHPDCIQCGQCVSVCPKNAVGYDKITLK
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECC
>Mature Secondary Structure
MNKFLVLWKKYSFVALMMFILLGLFDARIALLAIICMVAPIIVSLFKGRFWCGNLCPRGS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FYDNVVSKFSNKRKVPKFLKSYYFRAIVFVGMMTMFGLGIKQNLGNLYGIGMVFYRMIVV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TTLIGIVLSLFYNHRTWCNFCPMGSVASIISKFKKSKKVLQVSSSCVSCKMCEKKCPLGI
HHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VPYEYKGDILSHPDCIQCGQCVSVCPKNAVGYDKITLK
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]