| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is bltR [H]
Identifier: 187932463
GI number: 187932463
Start: 724600
End: 725427
Strand: Reverse
Name: bltR [H]
Synonym: CLL_A0723
Alternate gene names: 187932463
Gene position: 725427-724600 (Counterclockwise)
Preceding gene: 187933666
Following gene: 187933448
Centisome position: 19.09
GC content: 22.58
Gene sequence:
>828_bases ATGAGCGAAAAATTAAAAAAATATTTTAATACTGGAGAATTTGCTAAACTATGTAATGTAAAAAAACAAACACTTTTTCA TTATGATGCAATAGGAATTTTTTCGCCTGAGATAAAAGATAAAAATGGGTACAGATATTATTCACACCATCAATTTGAAA TCTTTAATGTTATTATGATTCTAAAAGGAATTAATATGCCATTAAAAGATATTAAATCTTATCTTGATAATAGAACTCCT GATTCATTAATTAATTTATTTAAAAATAAAATGTTAGAAATAGATAATGAAATTGAAAACTTAAATAGAATAAAAAAACT TATGCAAACTAAAATAGATGTGACAGAAAAATCATGTAAAATTGATCCATTAAAGATATCTTTAGAATTTAAAGAAGAAG AACATTTGATTCTTAGTAAATCTATAGAAAATGTTAGTTATAACGAATACCTAAGATCAGTATCAGAACATATGAAATAC TGCACTTCAAATAAACTAAATACAAGTTATTCCCTTGGTGCAATGATAAATAAAAAAAATATTCTTCAGGGTGTAAAAGA AAATTATTCTTATCTTTATACAAAAATAGATCCAAAATTAAATTGTAGTTCTATTTTTATTAAACCTAAAGGTATTTATG CTATAGCTTATCATAAAGGAGGTTATGAAAATATTGATTATACATATAAAAAAATAATATCATTTTTAAATTCATTTAAC CTTAATATTGGTGGTTATGCTTATGAAGAATACATTTTAGATGAAGCTTCCGTTATCGGATTTGAAAATTACTTAACAGA AATTTCAGTTGAGGTTAATACTAAATAG
Upstream 100 bases:
>100_bases TACCACATAAAATTTACATTATTGAAAAATCTTTATAGAAATATTATTATATAATCATAAGGTATATAGTAACCATATAG TCAATAGGAGGATTAAAAAA
Downstream 100 bases:
>100_bases ATTTCTAAGTGCTTAATTGAATTCATATATACAACATCAAATCTTGAAATAATTTCATCTTCTTATTGCATGTATTTTGG TTATTTCATATATCAATTAA
Product: multidrug-efflux transporter 2 regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSEKLKKYFNTGEFAKLCNVKKQTLFHYDAIGIFSPEIKDKNGYRYYSHHQFEIFNVIMILKGINMPLKDIKSYLDNRTP DSLINLFKNKMLEIDNEIENLNRIKKLMQTKIDVTEKSCKIDPLKISLEFKEEEHLILSKSIENVSYNEYLRSVSEHMKY CTSNKLNTSYSLGAMINKKNILQGVKENYSYLYTKIDPKLNCSSIFIKPKGIYAIAYHKGGYENIDYTYKKIISFLNSFN LNIGGYAYEEYILDEASVIGFENYLTEISVEVNTK
Sequences:
>Translated_275_residues MSEKLKKYFNTGEFAKLCNVKKQTLFHYDAIGIFSPEIKDKNGYRYYSHHQFEIFNVIMILKGINMPLKDIKSYLDNRTP DSLINLFKNKMLEIDNEIENLNRIKKLMQTKIDVTEKSCKIDPLKISLEFKEEEHLILSKSIENVSYNEYLRSVSEHMKY CTSNKLNTSYSLGAMINKKNILQGVKENYSYLYTKIDPKLNCSSIFIKPKGIYAIAYHKGGYENIDYTYKKIISFLNSFN LNIGGYAYEEYILDEASVIGFENYLTEISVEVNTK >Mature_274_residues SEKLKKYFNTGEFAKLCNVKKQTLFHYDAIGIFSPEIKDKNGYRYYSHHQFEIFNVIMILKGINMPLKDIKSYLDNRTPD SLINLFKNKMLEIDNEIENLNRIKKLMQTKIDVTEKSCKIDPLKISLEFKEEEHLILSKSIENVSYNEYLRSVSEHMKYC TSNKLNTSYSLGAMINKKNILQGVKENYSYLYTKIDPKLNCSSIFIKPKGIYAIAYHKGGYENIDYTYKKIISFLNSFNL NIGGYAYEEYILDEASVIGFENYLTEISVEVNTK
Specific function: Activates transcription of the blt gene in response to structurally dissimilar drugs [H]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH merR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 - InterPro: IPR011256 - InterPro: IPR015358 [H]
Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]
EC number: NA
Molecular weight: Translated: 32133; Mature: 32002
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKLKKYFNTGEFAKLCNVKKQTLFHYDAIGIFSPEIKDKNGYRYYSHHQFEIFNVIMI CCHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHH LKGINMPLKDIKSYLDNRTPDSLINLFKNKMLEIDNEIENLNRIKKLMQTKIDVTEKSCK HHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC IDPLKISLEFKEEEHLILSKSIENVSYNEYLRSVSEHMKYCTSNKLNTSYSLGAMINKKN CCEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCHHH ILQGVKENYSYLYTKIDPKLNCSSIFIKPKGIYAIAYHKGGYENIDYTYKKIISFLNSFN HHHHHHHCCEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCC LNIGGYAYEEYILDEASVIGFENYLTEISVEVNTK CCCCCEEHHHHHHCCHHHHHHHHHHEEEEEEEECC >Mature Secondary Structure SEKLKKYFNTGEFAKLCNVKKQTLFHYDAIGIFSPEIKDKNGYRYYSHHQFEIFNVIMI CHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHH LKGINMPLKDIKSYLDNRTPDSLINLFKNKMLEIDNEIENLNRIKKLMQTKIDVTEKSCK HHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC IDPLKISLEFKEEEHLILSKSIENVSYNEYLRSVSEHMKYCTSNKLNTSYSLGAMINKKN CCEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCHHH ILQGVKENYSYLYTKIDPKLNCSSIFIKPKGIYAIAYHKGGYENIDYTYKKIISFLNSFN HHHHHHHCCEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCC LNIGGYAYEEYILDEASVIGFENYLTEISVEVNTK CCCCCEEHHHHHHCCHHHHHHHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7608059; 8969508; 9384377 [H]