| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187932372
Identifier: 187932372
GI number: 187932372
Start: 3574518
End: 3575528
Strand: Reverse
Name: 187932372
Synonym: CLL_A3394
Alternate gene names: NA
Gene position: 3575528-3574518 (Counterclockwise)
Preceding gene: 187933161
Following gene: 187935074
Centisome position: 94.08
GC content: 23.34
Gene sequence:
>1011_bases ATGAAAAAAACATTTAGAGCTAATTTATATTTTTTAATAATACTATTAGGAGAAATAATAGGTGGTCAGGTATTAGGAAT TTTTTATGGCATTTTAGGAATAACTGATATAAGATTAATGTTATTTTTAAATCATATGATTTTATTTATAATACCTGCAA TAATATATTTAATAATAGTTAAACCCAATATAAAACAAACTTTTAAGCTTAATAAATTATATTTAAAAGACTTTTTCTTA ATAATTGTTTTATCATTTGTAAGTCAACCACTAGTTAGTCTATTTTCACTTATAACATCATTCTTTTTTGAAAATGATAT AGGAAATTTTGTATCAGAAATATCATCTACACCATTTTTAATAATGTTACTTTTAATGGCTGTTATGCCTGCTATAACAG AAGAAATAACTTTAAGAGGTATAGTTCAATCGGGATATGATGATAAAAGTGATTTAAAAACTTGTATAACAATTGGTTTA TTGTTTGGTATATTTCATTTAAATGGTCAACAATTTTTATATGCAGCTGTTTTAGGTGGAATTTTAGCTTATTTAGTTAG AGTAACTAATAGTATATTTGCTTCTATGACTTTGCATTTTATGATCAATGGAACATCAGTAGCGATGCAAAAGATATTAA CATTTTTACAAGATAAATTTGGAATTGAAGGAGCAGCACAGGATATATCAATTAAAGCTTTATCATTAGCTGAAAAGATG AATTTATTAAAAAGCTATATAGTAGCTGGAATGGTTTCAGCATTTTTAATTGTATTGATTCTTAAGAAACTTAAGAAAAT AAATGATAAAAGAAAGCAAAATTTAATTAATGAACAAATTCAATATAAAGAGGCTGAATTTATTGATTATCAGTACTTTA ATAAAGGAATAGCTTATAATAAAGAAGATAAAATAATGAATTGGCCATTAATAGTAACAATAATAATATACTTTATGTAT ATGGGGCTTACTATTATGGTTAATTTAATTAATAATCAGGGTATGCTTTAA
Upstream 100 bases:
>100_bases TATTGAAGTTAGTTACTTCATTATAAATTCTTTCCCAAGAGGTATTTATTTATACACTAAAATGTAAATCTAATTAATAA TTTGTAGTAAAGGTGTAAGT
Downstream 100 bases:
>100_bases AATAGTGTTAAAGCTAATGGAAAGAGGAATTTACTTTAAAAACTCTAAAATAAAACTTAGTCCAATGCTAGTCTGTTCTT ATACTATAATATCAACATTT
Product: caax amino protease family protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease; Caax Amino Protease Family Protein; CAAX-Like Membrane Endopeptidase
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKKTFRANLYFLIILLGEIIGGQVLGIFYGILGITDIRLMLFLNHMILFIIPAIIYLIIVKPNIKQTFKLNKLYLKDFFL IIVLSFVSQPLVSLFSLITSFFFENDIGNFVSEISSTPFLIMLLLMAVMPAITEEITLRGIVQSGYDDKSDLKTCITIGL LFGIFHLNGQQFLYAAVLGGILAYLVRVTNSIFASMTLHFMINGTSVAMQKILTFLQDKFGIEGAAQDISIKALSLAEKM NLLKSYIVAGMVSAFLIVLILKKLKKINDKRKQNLINEQIQYKEAEFIDYQYFNKGIAYNKEDKIMNWPLIVTIIIYFMY MGLTIMVNLINNQGML
Sequences:
>Translated_336_residues MKKTFRANLYFLIILLGEIIGGQVLGIFYGILGITDIRLMLFLNHMILFIIPAIIYLIIVKPNIKQTFKLNKLYLKDFFL IIVLSFVSQPLVSLFSLITSFFFENDIGNFVSEISSTPFLIMLLLMAVMPAITEEITLRGIVQSGYDDKSDLKTCITIGL LFGIFHLNGQQFLYAAVLGGILAYLVRVTNSIFASMTLHFMINGTSVAMQKILTFLQDKFGIEGAAQDISIKALSLAEKM NLLKSYIVAGMVSAFLIVLILKKLKKINDKRKQNLINEQIQYKEAEFIDYQYFNKGIAYNKEDKIMNWPLIVTIIIYFMY MGLTIMVNLINNQGML >Mature_336_residues MKKTFRANLYFLIILLGEIIGGQVLGIFYGILGITDIRLMLFLNHMILFIIPAIIYLIIVKPNIKQTFKLNKLYLKDFFL IIVLSFVSQPLVSLFSLITSFFFENDIGNFVSEISSTPFLIMLLLMAVMPAITEEITLRGIVQSGYDDKSDLKTCITIGL LFGIFHLNGQQFLYAAVLGGILAYLVRVTNSIFASMTLHFMINGTSVAMQKILTFLQDKFGIEGAAQDISIKALSLAEKM NLLKSYIVAGMVSAFLIVLILKKLKKINDKRKQNLINEQIQYKEAEFIDYQYFNKGIAYNKEDKIMNWPLIVTIIIYFMY MGLTIMVNLINNQGML
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38196; Mature: 38196
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFRANLYFLIILLGEIIGGQVLGIFYGILGITDIRLMLFLNHMILFIIPAIIYLIIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPNIKQTFKLNKLYLKDFFLIIVLSFVSQPLVSLFSLITSFFFENDIGNFVSEISSTPFL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IMLLLMAVMPAITEEITLRGIVQSGYDDKSDLKTCITIGLLFGIFHLNGQQFLYAAVLGG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ILAYLVRVTNSIFASMTLHFMINGTSVAMQKILTFLQDKFGIEGAAQDISIKALSLAEKM HHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH NLLKSYIVAGMVSAFLIVLILKKLKKINDKRKQNLINEQIQYKEAEFIDYQYFNKGIAYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KEDKIMNWPLIVTIIIYFMYMGLTIMVNLINNQGML CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKTFRANLYFLIILLGEIIGGQVLGIFYGILGITDIRLMLFLNHMILFIIPAIIYLIIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPNIKQTFKLNKLYLKDFFLIIVLSFVSQPLVSLFSLITSFFFENDIGNFVSEISSTPFL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IMLLLMAVMPAITEEITLRGIVQSGYDDKSDLKTCITIGLLFGIFHLNGQQFLYAAVLGG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ILAYLVRVTNSIFASMTLHFMINGTSVAMQKILTFLQDKFGIEGAAQDISIKALSLAEKM HHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH NLLKSYIVAGMVSAFLIVLILKKLKKINDKRKQNLINEQIQYKEAEFIDYQYFNKGIAYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KEDKIMNWPLIVTIIIYFMYMGLTIMVNLINNQGML CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA