| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932369
Identifier: 187932369
GI number: 187932369
Start: 2852912
End: 2853445
Strand: Reverse
Name: 187932369
Synonym: CLL_A2755
Alternate gene names: NA
Gene position: 2853445-2852912 (Counterclockwise)
Preceding gene: 187935119
Following gene: 187933800
Centisome position: 75.08
GC content: 27.15
Gene sequence:
>534_bases ATGGAAAAAGAACTATTTCAAAAAACAGAAGGACAGCTTTACCGTTACTATAGATATAAAAAACAAATTAATAAAAAATA TAGAAAAGTTGAATCATTAGAGGAGCAAATTAAAGCTATAGATAATCAAATGAGAAATGTTCATAATTATATAAGTTTAG ATACAATGCCACCAGGTGCAGGATGCGGAGAAAGAGTACAAGCTAGTATTAGTGGAAGCTCTTACATGGAAAAACAAATG GAGAATGAAGTTACTAAACTGGAAAAAAGAAAAGTAGAGAAAATTAAACAAAAGATTAAAACAGAATCCAAGATAATGGA AATGAAGAACTTTATAAGGATGATGGATACTAATATAGAAGAATTAAGGGAAGAGGATAAAAGAATTATTAAATTTTTCT ATGAAGATAGTAAAAACGATAAGGAAAATGTATCGTATCTAACAATTAAATTAAATTTATCAGCACCTACAGTATATAGA AGAAAACAAGTATTGGTTGAAAATATTGCTGATTCTATGTGGATGTATAAATAA
Upstream 100 bases:
>100_bases ATTATATAGATTTTGGAGAACCTCTTGAGGAAAAACCTATATTAGAAGAATTAGAAAAATTAATGATTAAAATTGTGGTA TAAAAAAGGAGGACTAGCCT
Downstream 100 bases:
>100_bases ATGAAAAAGTATATAGTAGAGTACATTTAGCAATATCAAAGTTAGATGTAGATTGGACTCTGTTAAATAGTATTTAGAAG GTCAGAACTAAATAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MEKELFQKTEGQLYRYYRYKKQINKKYRKVESLEEQIKAIDNQMRNVHNYISLDTMPPGAGCGERVQASISGSSYMEKQM ENEVTKLEKRKVEKIKQKIKTESKIMEMKNFIRMMDTNIEELREEDKRIIKFFYEDSKNDKENVSYLTIKLNLSAPTVYR RKQVLVENIADSMWMYK
Sequences:
>Translated_177_residues MEKELFQKTEGQLYRYYRYKKQINKKYRKVESLEEQIKAIDNQMRNVHNYISLDTMPPGAGCGERVQASISGSSYMEKQM ENEVTKLEKRKVEKIKQKIKTESKIMEMKNFIRMMDTNIEELREEDKRIIKFFYEDSKNDKENVSYLTIKLNLSAPTVYR RKQVLVENIADSMWMYK >Mature_177_residues MEKELFQKTEGQLYRYYRYKKQINKKYRKVESLEEQIKAIDNQMRNVHNYISLDTMPPGAGCGERVQASISGSSYMEKQM ENEVTKLEKRKVEKIKQKIKTESKIMEMKNFIRMMDTNIEELREEDKRIIKFFYEDSKNDKENVSYLTIKLNLSAPTVYR RKQVLVENIADSMWMYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21325; Mature: 21325
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKELFQKTEGQLYRYYRYKKQINKKYRKVESLEEQIKAIDNQMRNVHNYISLDTMPPGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GCGERVQASISGSSYMEKQMENEVTKLEKRKVEKIKQKIKTESKIMEMKNFIRMMDTNIE CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ELREEDKRIIKFFYEDSKNDKENVSYLTIKLNLSAPTVYRRKQVLVENIADSMWMYK HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKELFQKTEGQLYRYYRYKKQINKKYRKVESLEEQIKAIDNQMRNVHNYISLDTMPPGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GCGERVQASISGSSYMEKQMENEVTKLEKRKVEKIKQKIKTESKIMEMKNFIRMMDTNIE CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ELREEDKRIIKFFYEDSKNDKENVSYLTIKLNLSAPTVYRRKQVLVENIADSMWMYK HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA