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The map label for this gene is gerKA [H]

Identifier: 187932356

GI number: 187932356

Start: 3286093

End: 3287490

Strand: Reverse

Name: gerKA [H]

Synonym: CLL_A3168

Alternate gene names: 187932356

Gene position: 3287490-3286093 (Counterclockwise)

Preceding gene: 187933822

Following gene: 187933120

Centisome position: 86.51

GC content: 29.18

Gene sequence:

>1398_bases
ATGAATGAAAATTTAAATTACTTTAAAAAAAGATTTGAGAAAGCATTTGATGTAAAGTATAGGGATGTTGATACTAAGCT
TGGAAAGGCAACTTTGGTATTTATTGATACATTATGTAATTCACAATTTATAAGTGATTATATTGTAAGTCCACTGAAAA
ATTATAGCTATGAATGTAATACTTTAGATGATATCGTCACTAAAGTATTAGAAATCAACATAGTTGGTAATGCTAAAGAT
TTGGAAGATGCAGTATTACATATATTATCAGGGGATATAATACTAACATTTGAAAATGAAGAAAAAATGATTTTCTGTGA
AGTAAAGGGATTTCCGACTAGAGGTATAAGCATTCCAGTTACAGAATCTGTAGTAAAGGGTCCACGAGAAGGATTTAATG
AATTATTTGTTAATAGTATTTCATTAATAAGAAGGAAAATTAAGAATTCAGATTTAAAATTTGAGCCTTTATATGTGGGA
GAAAAATCACAAACAGTTGTATGTTTGTGTTACATAGAAGGGGTAGCACCAGAGTATTTAGTAAATGAAATTAAAGAAAC
AATCAATAATTTACATTTAGATTTTATATTAGATACTAATTATATAGAAGCTAAATTAAGAAAGAAAGATTCATTATTTG
ATACTGTGGGATATACAGAAAAGCCGGATGAAGTAGCAGCGAAAATAATGGAGGGAAGAGTAGCAGTATTAGTAGATGGA
ACACCATTTGTACTAACAATTCCATATTTCTTTTTAGAAAACTTTCAAACTCCAGATGATTATTATTTAAATAGACTTTT
TGTTAATTTTTTAAGAATATTAAGGTGGATTGCATTTTTTTTAGCTACATTTATGCCAGGATTATATATAGCTGTTGTTA
CACATCATTTTTCATTGCTCACACCAATGTTTACATTTAGATTAGCTGTTGCAAGAGCTGGGGTGCCATTTCCAACGGTT
TTTGAAGTTATAATAATGATGATAGCTTTCCAACTTATTAAAGAGGCTGGTTTAAGGTTACCACAACCAATTGGTGGAGC
CATGAGTATAGTCTCAGCATTGATACTTGGAGATGCAGCAGTAGGGGCAGGTATAGCATCAAGAATAACAATTATTATAG
TTGCATTAAGTACGTTAAGTTATTTCTTGATTCCTAAAATATATGGTGCAATTTCTATTTGGTCAATAGGTGTTGTAATA
CTTAGTGCATTCTTTGGACTACCGGGATTCTTTATGTCATTTATAATTTTATTAAGTAATATATCAGATTTAGAAACAGG
AGGATATTCATTCTTATTTCCTATTGCAACAGATACAACTTATAAATTTAGAGATACAATATTTAGAGGTAGATTAAGTA
AGATTTCTAAGACAATAATAGGAAAGGAGAAGAAATAA

Upstream 100 bases:

>100_bases
TTTTGATTATTTCTATCAAAATAATACCTTGATTTTAGTATTAACAAAAAAATGAATATTAAACCATTTAGGAGAGATAA
TATTTTTAGGTGATGTATTT

Downstream 100 bases:

>100_bases
TGAAAATTAAAAGGATTTTTATAATTTCATTAGTAATTTTAATATCCTTTTCTATGGTTTCATGTTTTAACTATAACGAT
ATAAATAAGGTGACCTTCGT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MNENLNYFKKRFEKAFDVKYRDVDTKLGKATLVFIDTLCNSQFISDYIVSPLKNYSYECNTLDDIVTKVLEINIVGNAKD
LEDAVLHILSGDIILTFENEEKMIFCEVKGFPTRGISIPVTESVVKGPREGFNELFVNSISLIRRKIKNSDLKFEPLYVG
EKSQTVVCLCYIEGVAPEYLVNEIKETINNLHLDFILDTNYIEAKLRKKDSLFDTVGYTEKPDEVAAKIMEGRVAVLVDG
TPFVLTIPYFFLENFQTPDDYYLNRLFVNFLRILRWIAFFLATFMPGLYIAVVTHHFSLLTPMFTFRLAVARAGVPFPTV
FEVIIMMIAFQLIKEAGLRLPQPIGGAMSIVSALILGDAAVGAGIASRITIIIVALSTLSYFLIPKIYGAISIWSIGVVI
LSAFFGLPGFFMSFIILLSNISDLETGGYSFLFPIATDTTYKFRDTIFRGRLSKISKTIIGKEKK

Sequences:

>Translated_465_residues
MNENLNYFKKRFEKAFDVKYRDVDTKLGKATLVFIDTLCNSQFISDYIVSPLKNYSYECNTLDDIVTKVLEINIVGNAKD
LEDAVLHILSGDIILTFENEEKMIFCEVKGFPTRGISIPVTESVVKGPREGFNELFVNSISLIRRKIKNSDLKFEPLYVG
EKSQTVVCLCYIEGVAPEYLVNEIKETINNLHLDFILDTNYIEAKLRKKDSLFDTVGYTEKPDEVAAKIMEGRVAVLVDG
TPFVLTIPYFFLENFQTPDDYYLNRLFVNFLRILRWIAFFLATFMPGLYIAVVTHHFSLLTPMFTFRLAVARAGVPFPTV
FEVIIMMIAFQLIKEAGLRLPQPIGGAMSIVSALILGDAAVGAGIASRITIIIVALSTLSYFLIPKIYGAISIWSIGVVI
LSAFFGLPGFFMSFIILLSNISDLETGGYSFLFPIATDTTYKFRDTIFRGRLSKISKTIIGKEKK
>Mature_465_residues
MNENLNYFKKRFEKAFDVKYRDVDTKLGKATLVFIDTLCNSQFISDYIVSPLKNYSYECNTLDDIVTKVLEINIVGNAKD
LEDAVLHILSGDIILTFENEEKMIFCEVKGFPTRGISIPVTESVVKGPREGFNELFVNSISLIRRKIKNSDLKFEPLYVG
EKSQTVVCLCYIEGVAPEYLVNEIKETINNLHLDFILDTNYIEAKLRKKDSLFDTVGYTEKPDEVAAKIMEGRVAVLVDG
TPFVLTIPYFFLENFQTPDDYYLNRLFVNFLRILRWIAFFLATFMPGLYIAVVTHHFSLLTPMFTFRLAVARAGVPFPTV
FEVIIMMIAFQLIKEAGLRLPQPIGGAMSIVSALILGDAAVGAGIASRITIIIVALSTLSYFLIPKIYGAISIWSIGVVI
LSAFFGLPGFFMSFIILLSNISDLETGGYSFLFPIATDTTYKFRDTIFRGRLSKISKTIIGKEKK

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 52408; Mature: 52408

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENLNYFKKRFEKAFDVKYRDVDTKLGKATLVFIDTLCNSQFISDYIVSPLKNYSYECN
CCCCHHHHHHHHHHHHCCEEECCCCCCCCCCEEEHHHHHCHHHHHHHHHHHHHCCCCCCC
TLDDIVTKVLEINIVGNAKDLEDAVLHILSGDIILTFENEEKMIFCEVKGFPTRGISIPV
CHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCC
TESVVKGPREGFNELFVNSISLIRRKIKNSDLKFEPLYVGEKSQTVVCLCYIEGVAPEYL
CHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEECCCCCEEEEEEEECCCCHHHH
VNEIKETINNLHLDFILDTNYIEAKLRKKDSLFDTVGYTEKPDEVAAKIMEGRVAVLVDG
HHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECC
TPFVLTIPYFFLENFQTPDDYYLNRLFVNFLRILRWIAFFLATFMPGLYIAVVTHHFSLL
CCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TPMFTFRLAVARAGVPFPTVFEVIIMMIAFQLIKEAGLRLPQPIGGAMSIVSALILGDAA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH
VGAGIASRITIIIVALSTLSYFLIPKIYGAISIWSIGVVILSAFFGLPGFFMSFIILLSN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
ISDLETGGYSFLFPIATDTTYKFRDTIFRGRLSKISKTIIGKEKK
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNENLNYFKKRFEKAFDVKYRDVDTKLGKATLVFIDTLCNSQFISDYIVSPLKNYSYECN
CCCCHHHHHHHHHHHHCCEEECCCCCCCCCCEEEHHHHHCHHHHHHHHHHHHHCCCCCCC
TLDDIVTKVLEINIVGNAKDLEDAVLHILSGDIILTFENEEKMIFCEVKGFPTRGISIPV
CHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCC
TESVVKGPREGFNELFVNSISLIRRKIKNSDLKFEPLYVGEKSQTVVCLCYIEGVAPEYL
CHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEECCCCCEEEEEEEECCCCHHHH
VNEIKETINNLHLDFILDTNYIEAKLRKKDSLFDTVGYTEKPDEVAAKIMEGRVAVLVDG
HHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECC
TPFVLTIPYFFLENFQTPDDYYLNRLFVNFLRILRWIAFFLATFMPGLYIAVVTHHFSLL
CCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TPMFTFRLAVARAGVPFPTVFEVIIMMIAFQLIKEAGLRLPQPIGGAMSIVSALILGDAA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH
VGAGIASRITIIIVALSTLSYFLIPKIYGAISIWSIGVVILSAFFGLPGFFMSFIILLSN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
ISDLETGGYSFLFPIATDTTYKFRDTIFRGRLSKISKTIIGKEKK
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]