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The map label for this gene is 187930486

Identifier: 187930486

GI number: 187930486

Start: 3586197

End: 3586805

Strand: Reverse

Name: 187930486

Synonym: Rpic_3420

Alternate gene names: NA

Gene position: 3586805-3586197 (Counterclockwise)

Preceding gene: 187930488

Following gene: 187930485

Centisome position: 90.98

GC content: 68.97

Gene sequence:

>609_bases
ATGAACAAAACCGACGGCCGCCGCCAGCGTGGCGAACGCGCGCGCGCCCAGGTGTTGGAGCACGCCACCGCCATCGCTTC
CACCGATGGGCTGGAGGGCCTCACCATCGGCCGCTTGGCCACGGATGCAGGCGTGGGCAAGGGCAATATCCAGGTGCTCT
TCGGCGACAAGGAAACGCTGCAGCTCTCCACGCTCGACGCGGGCGTGGTGCACTACCGCGAGAAGGTGGTGAAGCCCGCG
CTGGCGCTGGAAAGCCCGCTTGCCCGCCTGCGGGCGCTGACCGACGGCTGGTTCGACTACGTGGCCAGCGGCGCATCGCC
AGGCGGCTGCTTTGTCTGCGCGGCCAGCTACGAATACCGGGCCCGCCCGGGCGCGATCCAGGATCGTGTGCGCGGACACC
GCGAGTCGGTGCGTGCGCGGTTTCGCGAGACGATTGCCGCGGCGCAGGCGGCCGGTGAATTGCGCGCGGATGTCGACGTC
GATCAGCTCGTCTTTGAGATCGAATCGTTTCGCTCCAACGCCAACGTGGCGTTTCTGATGGGCGACATGGCGGTGTTCGA
GCGCGCGCGCCGCAGCACGCAGGCGCGCATCGACGCGGCGCTGGCCTGA

Upstream 100 bases:

>100_bases
GATCTCGGGTTATTAATATACGGTCGTACGTATACTAAAGGGCGATTGGCCCACGTCAAGGGTCGATTGTGTTGACCCCA
CTCATCGATAGGGCATTGCC

Downstream 100 bases:

>100_bases
GCGCGGCTGACCCGCGGCCGACGCGCGCGCACAACGCTGGTACTCAGGTCAGTCCCTCTCCGTCACCTTTGGTTACACTT
CAGCGGCATCGAGCGTGCGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNKTDGRRQRGERARAQVLEHATAIASTDGLEGLTIGRLATDAGVGKGNIQVLFGDKETLQLSTLDAGVVHYREKVVKPA
LALESPLARLRALTDGWFDYVASGASPGGCFVCAASYEYRARPGAIQDRVRGHRESVRARFRETIAAAQAAGELRADVDV
DQLVFEIESFRSNANVAFLMGDMAVFERARRSTQARIDAALA

Sequences:

>Translated_202_residues
MNKTDGRRQRGERARAQVLEHATAIASTDGLEGLTIGRLATDAGVGKGNIQVLFGDKETLQLSTLDAGVVHYREKVVKPA
LALESPLARLRALTDGWFDYVASGASPGGCFVCAASYEYRARPGAIQDRVRGHRESVRARFRETIAAAQAAGELRADVDV
DQLVFEIESFRSNANVAFLMGDMAVFERARRSTQARIDAALA
>Mature_202_residues
MNKTDGRRQRGERARAQVLEHATAIASTDGLEGLTIGRLATDAGVGKGNIQVLFGDKETLQLSTLDAGVVHYREKVVKPA
LALESPLARLRALTDGWFDYVASGASPGGCFVCAASYEYRARPGAIQDRVRGHRESVRARFRETIAAAQAAGELRADVDV
DQLVFEIESFRSNANVAFLMGDMAVFERARRSTQARIDAALA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21880; Mature: 21880

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTDGRRQRGERARAQVLEHATAIASTDGLEGLTIGRLATDAGVGKGNIQVLFGDKETL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCEEEEECCCCEE
QLSTLDAGVVHYREKVVKPALALESPLARLRALTDGWFDYVASGASPGGCFVCAASYEYR
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
ARPGAIQDRVRGHRESVRARFRETIAAAQAAGELRADVDVDQLVFEIESFRSNANVAFLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEE
GDMAVFERARRSTQARIDAALA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKTDGRRQRGERARAQVLEHATAIASTDGLEGLTIGRLATDAGVGKGNIQVLFGDKETL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCEEEEECCCCEE
QLSTLDAGVVHYREKVVKPALALESPLARLRALTDGWFDYVASGASPGGCFVCAASYEYR
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
ARPGAIQDRVRGHRESVRARFRETIAAAQAAGELRADVDVDQLVFEIESFRSNANVAFLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEE
GDMAVFERARRSTQARIDAALA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA