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The map label for this gene is yagT [H]

Identifier: 187930442

GI number: 187930442

Start: 3538134

End: 3538874

Strand: Reverse

Name: yagT [H]

Synonym: Rpic_3376

Alternate gene names: 187930442

Gene position: 3538874-3538134 (Counterclockwise)

Preceding gene: 187930443

Following gene: 187930441

Centisome position: 89.76

GC content: 70.04

Gene sequence:

>741_bases
ATGTCCGAACATCCCGCCGCAGCATCGAACGACCCCGCCTGCGAACCGGAGGGAGCGCCCGCGCGGCCGAGCCGGCGCGG
CTTTTTGCAGAGCGCGGCCGCCGCCGCCTCGGCCTTGGCGCTGCCGCATGAGCCGGCTGCAGCGCGCGTTTCGGCGCCAG
GTGCGGCCCGCCCGGCCGCGTTGGCACCGGCAAGGCCGGTGTCGCTCAATATCAACGGCAAGCGGTATGGGCTGTCGCTG
GAGCCGCGTGTCACGTTGCTCGATGCGCTGCGCGAGGTGCTGGGTCTGACCGGCACCAAGAAAGGCTGCGACCGCGGTCA
GTGCGGCGCGTGCACCGTCCTCGTGAATGGCCGGCGCATCAACAGCTGCCTGACGCTGGCGATCATGCACGAAGGCGAGG
ACATCACCACCGTCGAAGGCCTGGCGCACGTGCACGACGGCGTGGTCGACCGTGCGGCGTTACACCCGGTGCAGGCCGCG
TTTCTTGAACGCGACGCGTTTCAGTGCGGCTACTGCACGCCGGGCCAGATCTGCTCGGCGGTGGCGGTGCTGGAAGAGGC
GCGCTGCGGCATGCCGAGCACCGTCACGTCGCCCGCGGCGCTCGGTAATGACGGCGCCGTTGCGCTGACCGAAGACGAAA
TACGCGAGCGCATGAGCGGCAACCTCTGCCGCTGCGGCGCGTACCCCAACATCGTGGCGGCGATTCGCGTGGTGGCTGCC
AAGTCCGGCAACGGTGCCTGA

Upstream 100 bases:

>100_bases
CTGCCCTGCGGCTTCCCACCGCCCGGGTGCCGGGTATTCCGCTTGCTTTCCCCTGACGCATGTCCCCAGCTACGGCCGCC
CGGCCGGTGGAGCGTGCGCC

Downstream 100 bases:

>100_bases
GGAGCCTCATGCAATCGATTGCTTATGACCGTGCATCTTCCGTCGAGGCTGCCGTGCGCCTGGGCAACGAGCCGGGCGCG
CGCTATATCGGCGGCGGGAC

Product: (2Fe-2S)-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSEHPAAASNDPACEPEGAPARPSRRGFLQSAAAAASALALPHEPAAARVSAPGAARPAALAPARPVSLNINGKRYGLSL
EPRVTLLDALREVLGLTGTKKGCDRGQCGACTVLVNGRRINSCLTLAIMHEGEDITTVEGLAHVHDGVVDRAALHPVQAA
FLERDAFQCGYCTPGQICSAVAVLEEARCGMPSTVTSPAALGNDGAVALTEDEIRERMSGNLCRCGAYPNIVAAIRVVAA
KSGNGA

Sequences:

>Translated_246_residues
MSEHPAAASNDPACEPEGAPARPSRRGFLQSAAAAASALALPHEPAAARVSAPGAARPAALAPARPVSLNINGKRYGLSL
EPRVTLLDALREVLGLTGTKKGCDRGQCGACTVLVNGRRINSCLTLAIMHEGEDITTVEGLAHVHDGVVDRAALHPVQAA
FLERDAFQCGYCTPGQICSAVAVLEEARCGMPSTVTSPAALGNDGAVALTEDEIRERMSGNLCRCGAYPNIVAAIRVVAA
KSGNGA
>Mature_245_residues
SEHPAAASNDPACEPEGAPARPSRRGFLQSAAAAASALALPHEPAAARVSAPGAARPAALAPARPVSLNINGKRYGLSLE
PRVTLLDALREVLGLTGTKKGCDRGQCGACTVLVNGRRINSCLTLAIMHEGEDITTVEGLAHVHDGVVDRAALHPVQAAF
LERDAFQCGYCTPGQICSAVAVLEEARCGMPSTVTSPAALGNDGAVALTEDEIRERMSGNLCRCGAYPNIVAAIRVVAAK
SGNGA

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786480, Length=219, Percent_Identity=57.0776255707763, Blast_Score=215, Evalue=2e-57,
Organism=Escherichia coli, GI1789232, Length=169, Percent_Identity=40.2366863905325, Blast_Score=101, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17540638, Length=173, Percent_Identity=36.9942196531792, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI32566215, Length=192, Percent_Identity=31.25, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17539860, Length=184, Percent_Identity=30.9782608695652, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI17737937, Length=184, Percent_Identity=36.4130434782609, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24647199, Length=181, Percent_Identity=32.0441988950276, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24647195, Length=190, Percent_Identity=32.1052631578947, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24647197, Length=190, Percent_Identity=32.1052631578947, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24647201, Length=182, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24647193, Length=187, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 25224; Mature: 25093

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHPAAASNDPACEPEGAPARPSRRGFLQSAAAAASALALPHEPAAARVSAPGAARPAA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCC
LAPARPVSLNINGKRYGLSLEPRVTLLDALREVLGLTGTKKGCDRGQCGACTVLVNGRRI
CCCCCCEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEE
NSCLTLAIMHEGEDITTVEGLAHVHDGVVDRAALHPVQAAFLERDAFQCGYCTPGQICSA
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VAVLEEARCGMPSTVTSPAALGNDGAVALTEDEIRERMSGNLCRCGAYPNIVAAIRVVAA
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCEEEECCCCHHHHHHHHHHC
KSGNGA
CCCCCC
>Mature Secondary Structure 
SEHPAAASNDPACEPEGAPARPSRRGFLQSAAAAASALALPHEPAAARVSAPGAARPAA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCC
LAPARPVSLNINGKRYGLSLEPRVTLLDALREVLGLTGTKKGCDRGQCGACTVLVNGRRI
CCCCCCEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEE
NSCLTLAIMHEGEDITTVEGLAHVHDGVVDRAALHPVQAAFLERDAFQCGYCTPGQICSA
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VAVLEEARCGMPSTVTSPAALGNDGAVALTEDEIRERMSGNLCRCGAYPNIVAAIRVVAA
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCEEEECCCCHHHHHHHHHHC
KSGNGA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]