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The map label for this gene is ydfM [H]

Identifier: 187930422

GI number: 187930422

Start: 3512884

End: 3514032

Strand: Reverse

Name: ydfM [H]

Synonym: Rpic_3356

Alternate gene names: 187930422

Gene position: 3514032-3512884 (Counterclockwise)

Preceding gene: 187930429

Following gene: 187930420

Centisome position: 89.13

GC content: 68.15

Gene sequence:

>1149_bases
ATGACGCCCACATCCTCGACAGCACCTTCCGCGGCCGCGCGCCAGCAGAGCGCCGAACGCTCCACCCTGGTGAGTGCGGG
CGTCAATTGCGTGCTCTCGGCGGGGCAGATTGCGGCGGGGCTGTGGTCGCACTCGCAGGGCTTGGTGGCCGACGGGCTGC
ATACGTTGTCCGACTTGATCGCCGATGGCATCGTCTTCATTGCCAACCGCAACAGCCACAAGGGACCGGACGAAGACCAC
CAGTACGGCCACGCGCGCTACGAGAACGCCGCGTCGCTGGGGCTGGGGTTGCTGCTGGTCGGGGCGGGTGCGGGCATGAT
CTGGGCTGCGGTGGAGAGCCTGCGCTCGCCGCAGGGGCCGGCGCCGGTGCATGGTCCGGCGCTAGTGGTGGCGTTGATCG
CGCTGGCGGCCAAGGAGGGGCTCTTTCGCTACATGCTGGCCATGGCCAAGCGCATCAACTCACGCATGCTGATTGCAAAT
GCGTGGCATGCGCGTTCCGACGCGGTGTCGTCGTTGGTGGCGGCCGTCGGCGTGGCGGGCAACCTGATGGGCTATCACTG
GCTCGACCCGGTGGCCGCCTGCGTTGTCGGGTTGATGATTGGCCGTGTGGGCGTGCGCTTTGGTTGGGAAGCGCTCAATG
ACCTGATGGACCGGGCCTTGCCGCCCCCCCAGGTGGAGGCGATTCGTGCCAGCCTGGAAGCCACGCCGGGCGTGATCAAC
GTGCACGACCTGCGTACGCGTGTGACAGGAGACCAGGCATTGGTCGACGCGCATATCGAGGTGGATCCGCGCGTCTCCGT
GAGCGAGGGCCATGCGATTGCTGTCCGGGCCCGCACCAACGTGCTGACGGCGCATACGGCGATGGCGGTGCTCGACGTGC
AAATTCACGTCGACCCTCGCGAGCATATCGCGACCGACCCCGTGCCGCTGCCCGACCGCGAGGCGCTGCGCGCCGTGCTG
GCACAACTGCTGCCGCCCGGCACGCCGCTCGACGCGCGCCACTGCGTGCTGCATTACGTTGATGGGGCGGTGGAAGTTGA
CCTGGTCTTGCCGCCCGCGCTGGCTGGCGAACTCGCGCGCATTGCCGATGCCGTCCACGCGCGGTGGGATGGTCTTGTGC
GCCTGCGCGTGCTCGTCACAGACGCCTAG

Upstream 100 bases:

>100_bases
CGTGTTGTGATTGCGGCGATGAGATCTGACTCAGGCGGCGCGTTGGTGCGTGGCACAATGCTCGCGATTGCTTCGCACGC
TTCAATTGCACCGATTTCCC

Downstream 100 bases:

>100_bases
CCTAAGCCTGTCGCGCTAGCGGCATTGATCGACCGCGTTGGCCGGCTGCGTCTTGGCGGGGTCGAAATGCAGCTGCTCCA
ACCCTTTTTCCGTCAGCGAC

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTPTSSTAPSAAARQQSAERSTLVSAGVNCVLSAGQIAAGLWSHSQGLVADGLHTLSDLIADGIVFIANRNSHKGPDEDH
QYGHARYENAASLGLGLLLVGAGAGMIWAAVESLRSPQGPAPVHGPALVVALIALAAKEGLFRYMLAMAKRINSRMLIAN
AWHARSDAVSSLVAAVGVAGNLMGYHWLDPVAACVVGLMIGRVGVRFGWEALNDLMDRALPPPQVEAIRASLEATPGVIN
VHDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARTNVLTAHTAMAVLDVQIHVDPREHIATDPVPLPDREALRAVL
AQLLPPGTPLDARHCVLHYVDGAVEVDLVLPPALAGELARIADAVHARWDGLVRLRVLVTDA

Sequences:

>Translated_382_residues
MTPTSSTAPSAAARQQSAERSTLVSAGVNCVLSAGQIAAGLWSHSQGLVADGLHTLSDLIADGIVFIANRNSHKGPDEDH
QYGHARYENAASLGLGLLLVGAGAGMIWAAVESLRSPQGPAPVHGPALVVALIALAAKEGLFRYMLAMAKRINSRMLIAN
AWHARSDAVSSLVAAVGVAGNLMGYHWLDPVAACVVGLMIGRVGVRFGWEALNDLMDRALPPPQVEAIRASLEATPGVIN
VHDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARTNVLTAHTAMAVLDVQIHVDPREHIATDPVPLPDREALRAVL
AQLLPPGTPLDARHCVLHYVDGAVEVDLVLPPALAGELARIADAVHARWDGLVRLRVLVTDA
>Mature_381_residues
TPTSSTAPSAAARQQSAERSTLVSAGVNCVLSAGQIAAGLWSHSQGLVADGLHTLSDLIADGIVFIANRNSHKGPDEDHQ
YGHARYENAASLGLGLLLVGAGAGMIWAAVESLRSPQGPAPVHGPALVVALIALAAKEGLFRYMLAMAKRINSRMLIANA
WHARSDAVSSLVAAVGVAGNLMGYHWLDPVAACVVGLMIGRVGVRFGWEALNDLMDRALPPPQVEAIRASLEATPGVINV
HDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARTNVLTAHTAMAVLDVQIHVDPREHIATDPVPLPDREALRAVLA
QLLPPGTPLDARHCVLHYVDGAVEVDLVLPPALAGELARIADAVHARWDGLVRLRVLVTDA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Homo sapiens, GI57164948, Length=259, Percent_Identity=25.8687258687259, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1790349, Length=286, Percent_Identity=26.5734265734266, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6325032, Length=261, Percent_Identity=26.8199233716475, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6323831, Length=230, Percent_Identity=29.1304347826087, Blast_Score=95, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 40202; Mature: 40070

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTSSTAPSAAARQQSAERSTLVSAGVNCVLSAGQIAAGLWSHSQGLVADGLHTLSDLI
CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHCCCCCCHHHHHHHHHHHH
ADGIVFIANRNSHKGPDEDHQYGHARYENAASLGLGLLLVGAGAGMIWAAVESLRSPQGP
HCCEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
APVHGPALVVALIALAAKEGLFRYMLAMAKRINSRMLIANAWHARSDAVSSLVAAVGVAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
NLMGYHWLDPVAACVVGLMIGRVGVRFGWEALNDLMDRALPPPQVEAIRASLEATPGVIN
HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE
VHDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARTNVLTAHTAMAVLDVQIHVDPR
HHHHHHHCCCCCEEEEEEEEECCCEEECCCCEEEEEECCCCHHHHHEEEEEEEEEEECCH
EHIATDPVPLPDREALRAVLAQLLPPGTPLDARHCVLHYVDGAVEVDLVLPPALAGELAR
HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCEEEEEEECCHHHHHHHH
IADAVHARWDGLVRLRVLVTDA
HHHHHHHHHCCEEEEEEEEECC
>Mature Secondary Structure 
TPTSSTAPSAAARQQSAERSTLVSAGVNCVLSAGQIAAGLWSHSQGLVADGLHTLSDLI
CCCCCCCCHHHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHCCCCCCHHHHHHHHHHHH
ADGIVFIANRNSHKGPDEDHQYGHARYENAASLGLGLLLVGAGAGMIWAAVESLRSPQGP
HCCEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
APVHGPALVVALIALAAKEGLFRYMLAMAKRINSRMLIANAWHARSDAVSSLVAAVGVAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
NLMGYHWLDPVAACVVGLMIGRVGVRFGWEALNDLMDRALPPPQVEAIRASLEATPGVIN
HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE
VHDLRTRVTGDQALVDAHIEVDPRVSVSEGHAIAVRARTNVLTAHTAMAVLDVQIHVDPR
HHHHHHHCCCCCEEEEEEEEECCCEEECCCCEEEEEECCCCHHHHHEEEEEEEEEEECCH
EHIATDPVPLPDREALRAVLAQLLPPGTPLDARHCVLHYVDGAVEVDLVLPPALAGELAR
HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCEEEEEEECCHHHHHHHH
IADAVHARWDGLVRLRVLVTDA
HHHHHHHHHCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]