Click here to switch to the map view.

The map label for this gene is 187930318

Identifier: 187930318

GI number: 187930318

Start: 3400831

End: 3401490

Strand: Reverse

Name: 187930318

Synonym: Rpic_3251

Alternate gene names: NA

Gene position: 3401490-3400831 (Counterclockwise)

Preceding gene: 187930319

Following gene: 187930317

Centisome position: 86.28

GC content: 63.03

Gene sequence:

>660_bases
ATGGCGCTCTCGACCGAAATTTCGCTGGAAGACCTGGTCAGCCAGTTCCGTGGCCTGAACCTGAATGAGCCGGAAACGTG
GCCGATCGCGCCGCGCATCCTGTTCATGATTCTCTCCGCCGTGCTGGTGATCGGCCTGGGTTGGCAGTTCTACTGGAGCG
GCAAGTTTGACGAGCGCGACGCCAAGCGCACCGAGCAGGGCAACCTCAAGTCGGCATACCAGAGCAAGCTTGCGCAGGTC
GTGAACCTCGAAGCGCTGCGCAAGCAGAAGGCTGAGGTGGAGCAGCGTGTCGCCAAGCTTGAACTGCAACTGCCCAACAA
GACCGAGATGGATGCGCTGCTGGCCGACGTCAACCATGCCGGTATTGCGCGTGGCCTGACCTTCGACCTGTTCCGTCCGT
CCGGCGCGGTGATCAAGCCTTACTACGCCGAGATCCCGGTGGCGGTGAAGGTGAATGGCCGCTATCACGACATGGCGCTG
TTCGCTGCCGACGTGGCGGCGCTCTCACGCATCGTCACGCTGCAGAACATTTCGCTGACGGGCACCAAGGATGGCGGCAT
GGTGATGGAAACGCGTGCTGAAGCCTATCGGGCGCTCGACGCCGAGGAGCAGGCCGCGCAGCGCAAGGCGAACGCCGCCG
CCAAGGGAGGCGCCAAATGA

Upstream 100 bases:

>100_bases
AGGAACAGCGCCGCCTGTTCAACTTCACGATCCGCTTCCAATGGAAGGCCGAGCCGGCAGCGCCGGCCAAGCCGGGTGCG
GCCACGGCGGGGAAATAACC

Downstream 100 bases:

>100_bases
GGGGCCGCACCATGAGCCGTCGCCGCATGTCGCATCTTCTGCGTCTGTCGCCGCTGTGCCTGGCCGTCGTGCTGACGGCC
TGCGGCGCGAGCGAAGACGA

Product: Pilus assembly protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Type IV Pilus Assembly Protein PilO; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein; Pilus Assembly Protein PilO-Like

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MALSTEISLEDLVSQFRGLNLNEPETWPIAPRILFMILSAVLVIGLGWQFYWSGKFDERDAKRTEQGNLKSAYQSKLAQV
VNLEALRKQKAEVEQRVAKLELQLPNKTEMDALLADVNHAGIARGLTFDLFRPSGAVIKPYYAEIPVAVKVNGRYHDMAL
FAADVAALSRIVTLQNISLTGTKDGGMVMETRAEAYRALDAEEQAAQRKANAAAKGGAK

Sequences:

>Translated_219_residues
MALSTEISLEDLVSQFRGLNLNEPETWPIAPRILFMILSAVLVIGLGWQFYWSGKFDERDAKRTEQGNLKSAYQSKLAQV
VNLEALRKQKAEVEQRVAKLELQLPNKTEMDALLADVNHAGIARGLTFDLFRPSGAVIKPYYAEIPVAVKVNGRYHDMAL
FAADVAALSRIVTLQNISLTGTKDGGMVMETRAEAYRALDAEEQAAQRKANAAAKGGAK
>Mature_218_residues
ALSTEISLEDLVSQFRGLNLNEPETWPIAPRILFMILSAVLVIGLGWQFYWSGKFDERDAKRTEQGNLKSAYQSKLAQVV
NLEALRKQKAEVEQRVAKLELQLPNKTEMDALLADVNHAGIARGLTFDLFRPSGAVIKPYYAEIPVAVKVNGRYHDMALF
AADVAALSRIVTLQNISLTGTKDGGMVMETRAEAYRALDAEEQAAQRKANAAAKGGAK

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24107; Mature: 23976

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSTEISLEDLVSQFRGLNLNEPETWPIAPRILFMILSAVLVIGLGWQFYWSGKFDERD
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHH
AKRTEQGNLKSAYQSKLAQVVNLEALRKQKAEVEQRVAKLELQLPNKTEMDALLADVNHA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCHH
GIARGLTFDLFRPSGAVIKPYYAEIPVAVKVNGRYHDMALFAADVAALSRIVTLQNISLT
HHHCCCEEEEECCCCCEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEE
GTKDGGMVMETRAEAYRALDAEEQAAQRKANAAAKGGAK
CCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALSTEISLEDLVSQFRGLNLNEPETWPIAPRILFMILSAVLVIGLGWQFYWSGKFDERD
CCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHH
AKRTEQGNLKSAYQSKLAQVVNLEALRKQKAEVEQRVAKLELQLPNKTEMDALLADVNHA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCHH
GIARGLTFDLFRPSGAVIKPYYAEIPVAVKVNGRYHDMALFAADVAALSRIVTLQNISLT
HHHCCCEEEEECCCCCEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEE
GTKDGGMVMETRAEAYRALDAEEQAAQRKANAAAKGGAK
CCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA