| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187930262
Identifier: 187930262
GI number: 187930262
Start: 3346281
End: 3347174
Strand: Reverse
Name: 187930262
Synonym: Rpic_3195
Alternate gene names: NA
Gene position: 3347174-3346281 (Counterclockwise)
Preceding gene: 187930263
Following gene: 187930261
Centisome position: 84.9
GC content: 60.63
Gene sequence:
>894_bases ATGGAAAACGACGAGCAAATGAAAGCGCGTTTCACGCAAGCTTCCCAAGAAAAGCCTCATGCCGTGGCACAGCCCCAAGC CATCACACAGTTGGAGGCGACTTCGGAACCGGGCGAGCTGGCCGTCATGGCGCCGTACTGGCTCAACGGACTGCACAACA AACAGGGGATCGAGCTGGCTAAGCGGATCAATGAAGTGATCAACGAGGAGGAGCGCCTCATCATCCGCAACCCGCAATCC ATTCAGAAACTGATGGCCACCCTTTTTCCCGAGGCCAAGCCGCTCGGCCTGCACATTGTGGCCATGGAGCAATACCGGAC CGATGAACTGCTCAAGGCGAACCCGGCCGAGCCGGCATCGTTGCTGGCCGGTGCATTCACCCGCGACAAGGAGGGCGCCT ACCGCCCATCCGCCGGCGGCCCGGTGGTCATTCAGGATCGGGGCGATGCAGTGGATCTCACGTCCGAATCGCATGATGCC TACCAGGCATCCATCGAACTCGCCAAGGCCAAAGGCTGGAAACCTACAGAACTGGATCTCGCGCGGCTGGCCAAGGCGTT TGCAGCTCAGGGCGGCCTACCCGAGCAGGCCCAGCCGGTGGAGCAGGAACCCGAGACCAAGGCCGCAGAACACTCCCAAA CCATGCAAGCCGTGCGTGAAAGCTGGGATGAAATCATGCCGGCGACGGACGGCCATCATGTCGGCCCCATCGTGGCGGTG GATGGTCAATTCATTTGTCAAAAAACCGGCCGTGACCCCCAGCAGATCATTTGGCACGACACGAAAAAGATGGATGGTCA CGTCCCCGCCATCGGTCAGACGGCTGAAATCCGCTACCAAGACGGGCGCGGCCACGCCATCAACAAGGCCCTGAAACAGG GCGTCTCTCGCTGA
Upstream 100 bases:
>100_bases AACGGCAAGAATTCATTCAAATGCACGGAGATCCATTTGGACTGGATGCCAGCAGTTGAATCGTCATCTTTTGCAGCAAA AGAAAAGCTAAGGATCTCGC
Downstream 100 bases:
>100_bases GCTGAAGAGGAACTAGGTAATGGAAAACACAAACAAGAAACCCCTGAGCCACGCGCAAATGGCCAAGGCCTTCTCGATTG TTCTTGTCGTTGGCGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MENDEQMKARFTQASQEKPHAVAQPQAITQLEATSEPGELAVMAPYWLNGLHNKQGIELAKRINEVINEEERLIIRNPQS IQKLMATLFPEAKPLGLHIVAMEQYRTDELLKANPAEPASLLAGAFTRDKEGAYRPSAGGPVVIQDRGDAVDLTSESHDA YQASIELAKAKGWKPTELDLARLAKAFAAQGGLPEQAQPVEQEPETKAAEHSQTMQAVRESWDEIMPATDGHHVGPIVAV DGQFICQKTGRDPQQIIWHDTKKMDGHVPAIGQTAEIRYQDGRGHAINKALKQGVSR
Sequences:
>Translated_297_residues MENDEQMKARFTQASQEKPHAVAQPQAITQLEATSEPGELAVMAPYWLNGLHNKQGIELAKRINEVINEEERLIIRNPQS IQKLMATLFPEAKPLGLHIVAMEQYRTDELLKANPAEPASLLAGAFTRDKEGAYRPSAGGPVVIQDRGDAVDLTSESHDA YQASIELAKAKGWKPTELDLARLAKAFAAQGGLPEQAQPVEQEPETKAAEHSQTMQAVRESWDEIMPATDGHHVGPIVAV DGQFICQKTGRDPQQIIWHDTKKMDGHVPAIGQTAEIRYQDGRGHAINKALKQGVSR >Mature_297_residues MENDEQMKARFTQASQEKPHAVAQPQAITQLEATSEPGELAVMAPYWLNGLHNKQGIELAKRINEVINEEERLIIRNPQS IQKLMATLFPEAKPLGLHIVAMEQYRTDELLKANPAEPASLLAGAFTRDKEGAYRPSAGGPVVIQDRGDAVDLTSESHDA YQASIELAKAKGWKPTELDLARLAKAFAAQGGLPEQAQPVEQEPETKAAEHSQTMQAVRESWDEIMPATDGHHVGPIVAV DGQFICQKTGRDPQQIIWHDTKKMDGHVPAIGQTAEIRYQDGRGHAINKALKQGVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32651; Mature: 32651
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENDEQMKARFTQASQEKPHAVAQPQAITQLEATSEPGELAVMAPYWLNGLHNKQGIELA CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECHHHHCCCCCCHHHHHH KRINEVINEEERLIIRNPQSIQKLMATLFPEAKPLGLHIVAMEQYRTDELLKANPAEPAS HHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEEECHHCCHHHHCCCCCCHHH LLAGAFTRDKEGAYRPSAGGPVVIQDRGDAVDLTSESHDAYQASIELAKAKGWKPTELDL HHHHHHHCCCCCCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHH ARLAKAFAAQGGLPEQAQPVEQEPETKAAEHSQTMQAVRESWDEIMPATDGHHVGPIVAV HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE DGQFICQKTGRDPQQIIWHDTKKMDGHVPAIGQTAEIRYQDGRGHAINKALKQGVSR CCCEEECCCCCCHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure MENDEQMKARFTQASQEKPHAVAQPQAITQLEATSEPGELAVMAPYWLNGLHNKQGIELA CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECHHHHCCCCCCHHHHHH KRINEVINEEERLIIRNPQSIQKLMATLFPEAKPLGLHIVAMEQYRTDELLKANPAEPAS HHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEEECHHCCHHHHCCCCCCHHH LLAGAFTRDKEGAYRPSAGGPVVIQDRGDAVDLTSESHDAYQASIELAKAKGWKPTELDL HHHHHHHCCCCCCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHH ARLAKAFAAQGGLPEQAQPVEQEPETKAAEHSQTMQAVRESWDEIMPATDGHHVGPIVAV HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE DGQFICQKTGRDPQQIIWHDTKKMDGHVPAIGQTAEIRYQDGRGHAINKALKQGVSR CCCEEECCCCCCHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA