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The map label for this gene is hsdS [C]

Identifier: 187930240

GI number: 187930240

Start: 3325497

End: 3326681

Strand: Reverse

Name: hsdS [C]

Synonym: Rpic_3173

Alternate gene names: 187930240

Gene position: 3326681-3325497 (Counterclockwise)

Preceding gene: 187930241

Following gene: 187930239

Centisome position: 84.38

GC content: 56.54

Gene sequence:

>1185_bases
ATGAACAACAGGACATTGAAGCCCGGCGGGCGTTTGGTGAAATTCGGCGACGTGGTGCGCCTCTCGAAAGCCCGCAGCCA
AGATCCGCTGGCCGATGGCATTGAACGCTACGTCGGTCTGGAACACCTCGAACCAGGTGATTTGCGCATCCGCAGTTGGG
GCAGCGTCGCTGACGGCGTGACCTTCACCAGCGTGTTTCAACCTGGGCAGGTGCTGTTCGGCAAACGCCGCGCTTACCAG
CGCAAGGTGGCCGTGGCAGATTTTTCTGGCGTGTGTTCTGGTGACATCTACGTGCTGGAGACCAAGGACGCTCAGGTTTT
GCTGCCGGAGTTGCTGCTCTTCATTTGCCAGACCGACGCCTTCTTCGATCACGCGGTGGGCACATCTGCAGGCTCGCTGA
GCCCACGTACTAACTGGGCGAGCTTGGCGGATTTTGAGTTTGTACTACCGCCGATTGAGGAGCAGCAATCAGCCATAGTC
CTACTGAGTGCCGCAACCGACCAGTGCCATGCCATTGAAGCTGCACATCTCGCCGCAGGCCGAATGCTGCAGTCGTTCAA
GGATTCAATGCTTCTGTACAACACATCGGCCGTAGCAAATCCCTATCTGCTGAGCGACGTCTTGCTGAGGTCACCGGAAA
GCGGCTGCAGTGCGCCGCCGAAGGATGCCGACACAGGCTATTTCGTACTCGGATTGGCAGCACTGTCCCGGGATGGATAT
GTGTCAGGAGACTTCAAGCCCGTCGAGCCAACGAGCAAGATGGTCGCGGCAAAGCTCTCTAAGGGCGACATGCTGATTTC
TCGCTCCAATACAGTGGATCGAGTTGGATTCGTTGGGATTTTCAGCGACAACCGTGATGACGTGTCGTTTCCGGACACGA
TGATGCGTCTCCGGCCAAATCCTGCACTGGTCCACCCGGACTTCTTGGAAGCCTTGCTACAGACCACATCTGCCCGCGAA
TACCTCATGCGAATTGCAGCGGGCACTAGTGCCAGTATGAAGAAGATCAATCGCGCCAATTTGCTGCAGATGCGCCTGAA
CGTGCCGGATCTTGATGCCCAAGAATCGGCGCTCGATGCACTGCAGGAATTCAAAAACGCTATTGCAACGCAAAAGGCAC
GCTGGGATGCCGCTCTGCAACTAACAAAACTCATTGCCATGAGAACAATTGGGGGGGCGGCATAG

Upstream 100 bases:

>100_bases
AACGGGAGCGCCCAGCAGGACATACGAGACGCTGGGATGTGCAGCGCACGGCTCAAACTGAGTATTTCGGCTATGCCATG
CCGTTCGTGAGACAAGAATA

Downstream 100 bases:

>100_bases
TGTTTAACGAAGCCAACACCGTCGAAGCCTACGTCCGCGACCTGCTCGTTGGCCCGATCAAGGCAGTCCCTGCCAACACC
GTTCAGGAACCTCAAGGTAG

Product: restriction modification system

Products: NA

Alternate protein names: Type I Restriction- System Endonuclease S Subunit; Restriction System DNA Specificity Subunit; Restriction System DNA Specificity Domain; Restriction System Type I; Type I Restriction System Specificity Subunit; Type I Restriction Protein Fragment; Type I Restriction- Subunit S; Phosphoribosylformylglycinamidine Synthase; Restriction Endonuclease S Subunits-Like; Type I Restriction- System Specificity Determinant; Type I Restriction- S Subunit; Type I Restriction- System Specificity Subunit; Restriction- System Specificity Determinant; Subunit S Of Type I Restriction- System; Restriction Endonuclease S Subunits-Like Protein; Restriction Endonuclease S Subunit

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MNNRTLKPGGRLVKFGDVVRLSKARSQDPLADGIERYVGLEHLEPGDLRIRSWGSVADGVTFTSVFQPGQVLFGKRRAYQ
RKVAVADFSGVCSGDIYVLETKDAQVLLPELLLFICQTDAFFDHAVGTSAGSLSPRTNWASLADFEFVLPPIEEQQSAIV
LLSAATDQCHAIEAAHLAAGRMLQSFKDSMLLYNTSAVANPYLLSDVLLRSPESGCSAPPKDADTGYFVLGLAALSRDGY
VSGDFKPVEPTSKMVAAKLSKGDMLISRSNTVDRVGFVGIFSDNRDDVSFPDTMMRLRPNPALVHPDFLEALLQTTSARE
YLMRIAAGTSASMKKINRANLLQMRLNVPDLDAQESALDALQEFKNAIATQKARWDAALQLTKLIAMRTIGGAA

Sequences:

>Translated_394_residues
MNNRTLKPGGRLVKFGDVVRLSKARSQDPLADGIERYVGLEHLEPGDLRIRSWGSVADGVTFTSVFQPGQVLFGKRRAYQ
RKVAVADFSGVCSGDIYVLETKDAQVLLPELLLFICQTDAFFDHAVGTSAGSLSPRTNWASLADFEFVLPPIEEQQSAIV
LLSAATDQCHAIEAAHLAAGRMLQSFKDSMLLYNTSAVANPYLLSDVLLRSPESGCSAPPKDADTGYFVLGLAALSRDGY
VSGDFKPVEPTSKMVAAKLSKGDMLISRSNTVDRVGFVGIFSDNRDDVSFPDTMMRLRPNPALVHPDFLEALLQTTSARE
YLMRIAAGTSASMKKINRANLLQMRLNVPDLDAQESALDALQEFKNAIATQKARWDAALQLTKLIAMRTIGGAA
>Mature_394_residues
MNNRTLKPGGRLVKFGDVVRLSKARSQDPLADGIERYVGLEHLEPGDLRIRSWGSVADGVTFTSVFQPGQVLFGKRRAYQ
RKVAVADFSGVCSGDIYVLETKDAQVLLPELLLFICQTDAFFDHAVGTSAGSLSPRTNWASLADFEFVLPPIEEQQSAIV
LLSAATDQCHAIEAAHLAAGRMLQSFKDSMLLYNTSAVANPYLLSDVLLRSPESGCSAPPKDADTGYFVLGLAALSRDGY
VSGDFKPVEPTSKMVAAKLSKGDMLISRSNTVDRVGFVGIFSDNRDDVSFPDTMMRLRPNPALVHPDFLEALLQTTSARE
YLMRIAAGTSASMKKINRANLLQMRLNVPDLDAQESALDALQEFKNAIATQKARWDAALQLTKLIAMRTIGGAA

Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42834; Mature: 42834

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRTLKPGGRLVKFGDVVRLSKARSQDPLADGIERYVGLEHLEPGDLRIRSWGSVADGV
CCCCCCCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
TFTSVFQPGQVLFGKRRAYQRKVAVADFSGVCSGDIYVLETKDAQVLLPELLLFICQTDA
EEEHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCH
FFDHAVGTSAGSLSPRTNWASLADFEFVLPPIEEQQSAIVLLSAATDQCHAIEAAHLAAG
HHHHHHCCCCCCCCCCCCCCHHCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
RMLQSFKDSMLLYNTSAVANPYLLSDVLLRSPESGCSAPPKDADTGYFVLGLAALSRDGY
HHHHHHHHCEEEEECCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCC
VSGDFKPVEPTSKMVAAKLSKGDMLISRSNTVDRVGFVGIFSDNRDDVSFPDTMMRLRPN
CCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCC
PALVHPDFLEALLQTTSAREYLMRIAAGTSASMKKINRANLLQMRLNVPDLDAQESALDA
CCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
LQEFKNAIATQKARWDAALQLTKLIAMRTIGGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNRTLKPGGRLVKFGDVVRLSKARSQDPLADGIERYVGLEHLEPGDLRIRSWGSVADGV
CCCCCCCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
TFTSVFQPGQVLFGKRRAYQRKVAVADFSGVCSGDIYVLETKDAQVLLPELLLFICQTDA
EEEHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCH
FFDHAVGTSAGSLSPRTNWASLADFEFVLPPIEEQQSAIVLLSAATDQCHAIEAAHLAAG
HHHHHHCCCCCCCCCCCCCCHHCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
RMLQSFKDSMLLYNTSAVANPYLLSDVLLRSPESGCSAPPKDADTGYFVLGLAALSRDGY
HHHHHHHHCEEEEECCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCC
VSGDFKPVEPTSKMVAAKLSKGDMLISRSNTVDRVGFVGIFSDNRDDVSFPDTMMRLRPN
CCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCC
PALVHPDFLEALLQTTSAREYLMRIAAGTSASMKKINRANLLQMRLNVPDLDAQESALDA
CCEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
LQEFKNAIATQKARWDAALQLTKLIAMRTIGGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA