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The map label for this gene is yphB [H]

Identifier: 187930061

GI number: 187930061

Start: 3120146

End: 3121030

Strand: Reverse

Name: yphB [H]

Synonym: Rpic_2993

Alternate gene names: 187930061

Gene position: 3121030-3120146 (Counterclockwise)

Preceding gene: 187930062

Following gene: 187930060

Centisome position: 79.16

GC content: 64.75

Gene sequence:

>885_bases
ATGCCTACGTTGCAGCTTGAAAACGGCGTACTGCGCGCCGAGGTGTTGCCCGAGGCCGGCGGCGGGTTGCTGCGTTTCGA
TCTGTTGCGCGATGGCGCTGTGATGCCCATCTTTCGTCCGGGCGAGACAGACGCCGCGCTGCGCGATACGAGAACGCTGG
CCTGTTATCCGCTGGTGCCGTGGTCCAACCGCATCGGCGGCGGGCAGTTCCCGTTCCGGGGGCGGACCATCGAAGTGCCG
CGCACGCGTGGCGACGAGCCGTATCCGCTGCATGGTCACGGCTGGCTGATGCCGTGGCACCCAGTCTCGCAGACAGCCAC
GTCGGTCGAACTCGCTGCGATGGTCGATCACGGCCGCCCGTTCCGCTATCTCGCGTTGCAGCGCTATGTGCTGGCAGGCA
ACACGCTGAATATCGCGCTGACGGTACGCAACGAAGGCTCACCGCTGCCATTCGGGCTGGGCGTGCATCCGTTTTTCCCC
CGCACGCCCGATGTCCAGTTGCGCGCGGGAGCCACGGCCATGTGGCAATCCGCGCCGGACTATCTGCCGACGGTCCTGAA
CGCGCCATCGGCAGATGCAGACTTTCGCAAGCTGCGGAAGCTGGACGCCAGCGCCGCCATCAATCACAGCTTTGAAGGCT
GGGATGGCCGCGCCGAAATCGTCTGGCCCAGCCGCCGCGTGTCTGTGGGCATCACCGCCGATACGTCGCGCTATGTGTTG
TACACGCCGGTTGCGTACGACTTCTTCTGCTTCGAGCCGGTCGACCACGCGATCAATGCGCACAACCTGCCGGGCTTGCC
GCAAGACCACGGCCTGACCATTCTCGGCACCGGGCAGAGCTTGCAGCGCAGCTATCAATTCACCGTGAATCAACCCAACG
CATGA

Upstream 100 bases:

>100_bases
GGCTTGTCGGCGCGCCGCTTGGCGGAAGACGTGAATGCCGGCGCGACGTTCCGGCTTGCCGTGCCGGACGTACGCGGATT
GCCGGAGGGCCGCTTCGGCC

Downstream 100 bases:

>100_bases
CTGCTTCTCCGATGTCTTTTCCGCCGCGTCTCGCAGGCAAAGTCGCCCTGGTGACGGGCGCCACGCAAGGCATTGGCGGT
GCGATCGCCAAGCTGTTCGT

Product: Aldose 1-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MPTLQLENGVLRAEVLPEAGGGLLRFDLLRDGAVMPIFRPGETDAALRDTRTLACYPLVPWSNRIGGGQFPFRGRTIEVP
RTRGDEPYPLHGHGWLMPWHPVSQTATSVELAAMVDHGRPFRYLALQRYVLAGNTLNIALTVRNEGSPLPFGLGVHPFFP
RTPDVQLRAGATAMWQSAPDYLPTVLNAPSADADFRKLRKLDASAAINHSFEGWDGRAEIVWPSRRVSVGITADTSRYVL
YTPVAYDFFCFEPVDHAINAHNLPGLPQDHGLTILGTGQSLQRSYQFTVNQPNA

Sequences:

>Translated_294_residues
MPTLQLENGVLRAEVLPEAGGGLLRFDLLRDGAVMPIFRPGETDAALRDTRTLACYPLVPWSNRIGGGQFPFRGRTIEVP
RTRGDEPYPLHGHGWLMPWHPVSQTATSVELAAMVDHGRPFRYLALQRYVLAGNTLNIALTVRNEGSPLPFGLGVHPFFP
RTPDVQLRAGATAMWQSAPDYLPTVLNAPSADADFRKLRKLDASAAINHSFEGWDGRAEIVWPSRRVSVGITADTSRYVL
YTPVAYDFFCFEPVDHAINAHNLPGLPQDHGLTILGTGQSLQRSYQFTVNQPNA
>Mature_293_residues
PTLQLENGVLRAEVLPEAGGGLLRFDLLRDGAVMPIFRPGETDAALRDTRTLACYPLVPWSNRIGGGQFPFRGRTIEVPR
TRGDEPYPLHGHGWLMPWHPVSQTATSVELAAMVDHGRPFRYLALQRYVLAGNTLNIALTVRNEGSPLPFGLGVHPFFPR
TPDVQLRAGATAMWQSAPDYLPTVLNAPSADADFRKLRKLDASAAINHSFEGWDGRAEIVWPSRRVSVGITADTSRYVLY
TPVAYDFFCFEPVDHAINAHNLPGLPQDHGLTILGTGQSLQRSYQFTVNQPNA

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=276, Percent_Identity=31.5217391304348, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1790311, Length=188, Percent_Identity=26.5957446808511, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 32463; Mature: 32332

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLQLENGVLRAEVLPEAGGGLLRFDLLRDGAVMPIFRPGETDAALRDTRTLACYPLVP
CCCEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHCCCEEEEEEECC
WSNRIGGGQFPFRGRTIEVPRTRGDEPYPLHGHGWLMPWHPVSQTATSVELAAMVDHGRP
CCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC
FRYLALQRYVLAGNTLNIALTVRNEGSPLPFGLGVHPFFPRTPDVQLRAGATAMWQSAPD
EEEHEEEEHEEECCEEEEEEEECCCCCCCEECCCCCCCCCCCCCEEEECCCHHHHCCCCC
YLPTVLNAPSADADFRKLRKLDASAAINHSFEGWDGRAEIVWPSRRVSVGITADTSRYVL
HHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEE
YTPVAYDFFCFEPVDHAINAHNLPGLPQDHGLTILGTGQSLQRSYQFTVNQPNA
ECCCEEEEEEECCHHHHCCCCCCCCCCCCCCEEEEECCHHHCEEEEEEEECCCC
>Mature Secondary Structure 
PTLQLENGVLRAEVLPEAGGGLLRFDLLRDGAVMPIFRPGETDAALRDTRTLACYPLVP
CCEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHCCCEEEEEEECC
WSNRIGGGQFPFRGRTIEVPRTRGDEPYPLHGHGWLMPWHPVSQTATSVELAAMVDHGRP
CCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC
FRYLALQRYVLAGNTLNIALTVRNEGSPLPFGLGVHPFFPRTPDVQLRAGATAMWQSAPD
EEEHEEEEHEEECCEEEEEEEECCCCCCCEECCCCCCCCCCCCCEEEECCCHHHHCCCCC
YLPTVLNAPSADADFRKLRKLDASAAINHSFEGWDGRAEIVWPSRRVSVGITADTSRYVL
HHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEE
YTPVAYDFFCFEPVDHAINAHNLPGLPQDHGLTILGTGQSLQRSYQFTVNQPNA
ECCCEEEEEEECCHHHHCCCCCCCCCCCCCCEEEEECCHHHCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]