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The map label for this gene is nudJ [H]

Identifier: 187930036

GI number: 187930036

Start: 3091918

End: 3092412

Strand: Reverse

Name: nudJ [H]

Synonym: Rpic_2968

Alternate gene names: 187930036

Gene position: 3092412-3091918 (Counterclockwise)

Preceding gene: 187930046

Following gene: 187930035

Centisome position: 78.44

GC content: 66.26

Gene sequence:

>495_bases
ATGAACCAAGCTGTCCGCTGGAAACCCAGCGTTACCGTTGCCGCCGTCATTGAACAGGACGGGCGCTTTCTGCTGGTGGA
GGAGCACACCGATGCTGGCTTGCGCCTGAACCAGCCTGCCGGCCATCTCGACCCGGACGAAAGCCTGGTCGACGCCGTCG
CGCGCGAGGCACTGGAAGAAACCGCCTACAGCTTTGTGCCGACCGCGTTTCTGGGCTGCTACATGGCGCAGTTCCAGCCG
CCGCAGGGGGATCCGGTCACCTACGTGCGGATGGCATTTACCGGCGAGCTGGGCCCCCAAGACCCGCGCCGCACGCTGGA
CGACGGCATCGTTCGCACTGTCTGGATGACGGCGGATGAAGTCCGCGCCAGCCGCGAGCGCCATCGCAGCCCGCTGCTGC
TCGCCTGCGTGGAGGACTACCTGGCCGGCAAGCGGTATCCGCTTGACGTCATCCACACGCACGCCAGCGTGTACGGCCTG
GGAGCGCAGTCATGA

Upstream 100 bases:

>100_bases
CTCAGGCCTGGCGCGACATGCCCTTGTTCCAGCGGCCCCATGCAAGCGGGGAGGGCAGCCTCCAGCTACAATAACGCCTT
GTTTTTGTTGCCTTTTTGCC

Downstream 100 bases:

>100_bases
GCAAGAAGCGCATCGTCGTCGGGATGTCGGGCGGCGTGGATTCCTCCGTCACTGCCTGGCTGCTCAAACAGCAGGGCTAC
GACGTCGTCGGCCTGTTCAT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNQAVRWKPSVTVAAVIEQDGRFLLVEEHTDAGLRLNQPAGHLDPDESLVDAVAREALEETAYSFVPTAFLGCYMAQFQP
PQGDPVTYVRMAFTGELGPQDPRRTLDDGIVRTVWMTADEVRASRERHRSPLLLACVEDYLAGKRYPLDVIHTHASVYGL
GAQS

Sequences:

>Translated_164_residues
MNQAVRWKPSVTVAAVIEQDGRFLLVEEHTDAGLRLNQPAGHLDPDESLVDAVAREALEETAYSFVPTAFLGCYMAQFQP
PQGDPVTYVRMAFTGELGPQDPRRTLDDGIVRTVWMTADEVRASRERHRSPLLLACVEDYLAGKRYPLDVIHTHASVYGL
GAQS
>Mature_164_residues
MNQAVRWKPSVTVAAVIEQDGRFLLVEEHTDAGLRLNQPAGHLDPDESLVDAVAREALEETAYSFVPTAFLGCYMAQFQP
PQGDPVTYVRMAFTGELGPQDPRRTLDDGIVRTVWMTADEVRASRERHRSPLLLACVEDYLAGKRYPLDVIHTHASVYGL
GAQS

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=144, Percent_Identity=40.9722222222222, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 18196; Mature: 18196

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQAVRWKPSVTVAAVIEQDGRFLLVEEHTDAGLRLNQPAGHLDPDESLVDAVAREALEE
CCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
TAYSFVPTAFLGCYMAQFQPPQGDPVTYVRMAFTGELGPQDPRRTLDDGIVRTVWMTADE
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHH
VRASRERHRSPLLLACVEDYLAGKRYPLDVIHTHASVYGLGAQS
HHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MNQAVRWKPSVTVAAVIEQDGRFLLVEEHTDAGLRLNQPAGHLDPDESLVDAVAREALEE
CCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
TAYSFVPTAFLGCYMAQFQPPQGDPVTYVRMAFTGELGPQDPRRTLDDGIVRTVWMTADE
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHH
VRASRERHRSPLLLACVEDYLAGKRYPLDVIHTHASVYGLGAQS
HHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA