Click here to switch to the map view.

The map label for this gene is 187929982

Identifier: 187929982

GI number: 187929982

Start: 3028861

End: 3029457

Strand: Reverse

Name: 187929982

Synonym: Rpic_2914

Alternate gene names: NA

Gene position: 3029457-3028861 (Counterclockwise)

Preceding gene: 187929983

Following gene: 187929981

Centisome position: 76.84

GC content: 66.33

Gene sequence:

>597_bases
ATGAGCGCCATTGCACGGTTGTCACATCGCCGGTTGGGCAAGCGCGGGCAGCGCGGCACGACCCTGATCGAGATCCTGAT
TTCGGTGGTGATCCTGCTGGTGGCGCTGTTGGGCGCGGCCGGAATGATGGTCCGCTCGAACCAGTCCGAGATGGAGTCCT
ACCAGCGCGTGCAGGCCCTGACGCTGCTGCAGGACATGGCGGCGCGGCTCAATGCCAACCGCCAGGTGGCCGCCTGCTAC
GCTGTGGCCGGCGCGATGACCACTGCCGGCACGGGTGGCATCTCGGCGCCCAGCTGCACGACGGGCTCGGCCGCACAGCA
AGCCACTGTCACATCCGATCTCACAGCTTGGAACAATGCGCTGCTGGGCAATACCGAGACCGCTGCAAGCGGCACCGTTG
CCCTGGGCGCCATGATTGGCGCGCGCGGCTGCATCGAAGCCATCGACACCGTCAACCAGGTCTATCGCGTGACGGTCGCG
TGGCAAGGCCTGGTCAAGACCGTGGTGCCGTCACTGCCATGCGGCAGCGGCAATTTCGGTAGCGATGGCTACCGCCGCGC
CATCAGCGTGCAGGTGCGCATGGGGGTGCTGTCATGA

Upstream 100 bases:

>100_bases
CGTTCCAGGTTACGCCGACGAGTTCGTCGCAATCGGTCTCGCCTAGCTGCGTGCAAGTGGGCGGCAGCGGCCGCATCGCC
GTGGTTTCGGGGACGTGCTC

Downstream 100 bases:

>100_bases
TGGGCAATCGCACGCTGCGGCGTCTGCAGCGCGGGATGTCGCTGATCGAATTGATGGTCGGCATGACGCTGGGGCTGCTG
CTGCTGACCGCGCTGGCGAG

Product: putative type 4 fimbrial biogenesis transmembrane protein

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Related Transmembrane Protein; Type 4 Fimbrial Biogenesis Relatedtransmembrane Protein; Type IV Pilus Assembly Protein PilV

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSAIARLSHRRLGKRGQRGTTLIEILISVVILLVALLGAAGMMVRSNQSEMESYQRVQALTLLQDMAARLNANRQVAACY
AVAGAMTTAGTGGISAPSCTTGSAAQQATVTSDLTAWNNALLGNTETAASGTVALGAMIGARGCIEAIDTVNQVYRVTVA
WQGLVKTVVPSLPCGSGNFGSDGYRRAISVQVRMGVLS

Sequences:

>Translated_198_residues
MSAIARLSHRRLGKRGQRGTTLIEILISVVILLVALLGAAGMMVRSNQSEMESYQRVQALTLLQDMAARLNANRQVAACY
AVAGAMTTAGTGGISAPSCTTGSAAQQATVTSDLTAWNNALLGNTETAASGTVALGAMIGARGCIEAIDTVNQVYRVTVA
WQGLVKTVVPSLPCGSGNFGSDGYRRAISVQVRMGVLS
>Mature_197_residues
SAIARLSHRRLGKRGQRGTTLIEILISVVILLVALLGAAGMMVRSNQSEMESYQRVQALTLLQDMAARLNANRQVAACYA
VAGAMTTAGTGGISAPSCTTGSAAQQATVTSDLTAWNNALLGNTETAASGTVALGAMIGARGCIEAIDTVNQVYRVTVAW
QGLVKTVVPSLPCGSGNFGSDGYRRAISVQVRMGVLS

Specific function: Unknown

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20489; Mature: 20358

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIARLSHRRLGKRGQRGTTLIEILISVVILLVALLGAAGMMVRSNQSEMESYQRVQAL
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH
TLLQDMAARLNANRQVAACYAVAGAMTTAGTGGISAPSCTTGSAAQQATVTSDLTAWNNA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH
LLGNTETAASGTVALGAMIGARGCIEAIDTVNQVYRVTVAWQGLVKTVVPSLPCGSGNFG
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SDGYRRAISVQVRMGVLS
CCHHHHHEEEEEECCCCC
>Mature Secondary Structure 
SAIARLSHRRLGKRGQRGTTLIEILISVVILLVALLGAAGMMVRSNQSEMESYQRVQAL
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH
TLLQDMAARLNANRQVAACYAVAGAMTTAGTGGISAPSCTTGSAAQQATVTSDLTAWNNA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH
LLGNTETAASGTVALGAMIGARGCIEAIDTVNQVYRVTVAWQGLVKTVVPSLPCGSGNFG
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SDGYRRAISVQVRMGVLS
CCHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA