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The map label for this gene is dedA [H]

Identifier: 187929903

GI number: 187929903

Start: 2943366

End: 2944013

Strand: Reverse

Name: dedA [H]

Synonym: Rpic_2835

Alternate gene names: 187929903

Gene position: 2944013-2943366 (Counterclockwise)

Preceding gene: 187929926

Following gene: 187929900

Centisome position: 74.67

GC content: 61.88

Gene sequence:

>648_bases
ATGCAATTGGTCGACATCGTGCTGCATGTCGACAAGTCGTTGGGCTTGCTGATTCAGCAATACGGCGCGTGGGTCTACGT
GCTGCTGTTCGCCATCGTGTTTGCCGAAACCGGGCTCGTGGTGCTGCCTTTTCTGCCGGGCGACACCCTGCTGTTCATTG
CCGGCGCCATGTGCGCCACCGGCCAGATGGACGCCTGGCTGCTCATCGTGCTGCTGGTGATTGCCGCGACGACGGGCAAC
ACGGTCAACTATTTCGTCGGCTCCTGGATCGGCCCCAAGGTATTCGACGGTCACATCCGCTTCCTTGATCACCAAGCGCT
GCTCAGGACCCACACCTTTTACGAACGCCACGGCGGCAAGACGCTCGTGATGGCGCGCTTCATCCCGGTGGTGCGGACGT
TCGCGCCGTTTGTGGCGGGCGTGTCGAAGATGACGTTCGCGAAGTTCCAGCTCTTCAACATGATCGGCGCGGTGCTGTGG
GTGGCGATCCTTGTGCTGTCGGGCGAGGCGTTCGGCAATGTGCCCGTGATTCGCGATCACCTGAACACGATCGTGCTGAT
TGGCCTGGGCGCGGCGATTGTGCCGCTAATGCTCGGCGGGCTGTGGAAGTTGCTCAAACGCCGTCGCGGCGCCGTCGCGC
AGAAGTAA

Upstream 100 bases:

>100_bases
GTGCGGCGCACCGACGCAAGCCTCGCCAACGGCTAGGGGAAATCTAAGTCACATCCGGTATCATTTCCCGCTCGTTCAGG
GGGATGGTTTGGATATCGTG

Downstream 100 bases:

>100_bases
GCGTCAGTTCAGGTTCTTGCTCATGGCGCGCAGTGTTGGCATGCGCTCCTTGAGCTTGGCCGTGTCGGCTGCATCGGGCC
GGGCGTCCACATAGGCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQLVDIVLHVDKSLGLLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCATGQMDAWLLIVLLVIAATTGN
TVNYFVGSWIGPKVFDGHIRFLDHQALLRTHTFYERHGGKTLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLW
VAILVLSGEAFGNVPVIRDHLNTIVLIGLGAAIVPLMLGGLWKLLKRRRGAVAQK

Sequences:

>Translated_215_residues
MQLVDIVLHVDKSLGLLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCATGQMDAWLLIVLLVIAATTGN
TVNYFVGSWIGPKVFDGHIRFLDHQALLRTHTFYERHGGKTLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLW
VAILVLSGEAFGNVPVIRDHLNTIVLIGLGAAIVPLMLGGLWKLLKRRRGAVAQK
>Mature_215_residues
MQLVDIVLHVDKSLGLLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCATGQMDAWLLIVLLVIAATTGN
TVNYFVGSWIGPKVFDGHIRFLDHQALLRTHTFYERHGGKTLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLW
VAILVLSGEAFGNVPVIRDHLNTIVLIGLGAAIVPLMLGGLWKLLKRRRGAVAQK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=196, Percent_Identity=45.9183673469388, Blast_Score=192, Evalue=1e-50,
Organism=Escherichia coli, GI1789384, Length=162, Percent_Identity=36.4197530864198, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1789481, Length=162, Percent_Identity=37.037037037037, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23574; Mature: 23574

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLVDIVLHVDKSLGLLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCC
GQMDAWLLIVLLVIAATTGNTVNYFVGSWIGPKVFDGHIRFLDHQALLRTHTFYERHGGK
CCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCC
TLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLWVAILVLSGEAFGNVPVIRDH
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
LNTIVLIGLGAAIVPLMLGGLWKLLKRRRGAVAQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQLVDIVLHVDKSLGLLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCC
GQMDAWLLIVLLVIAATTGNTVNYFVGSWIGPKVFDGHIRFLDHQALLRTHTFYERHGGK
CCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCC
TLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLWVAILVLSGEAFGNVPVIRDH
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
LNTIVLIGLGAAIVPLMLGGLWKLLKRRRGAVAQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]