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The map label for this gene is ydjR [C]

Identifier: 187929863

GI number: 187929863

Start: 2905005

End: 2905586

Strand: Reverse

Name: ydjR [C]

Synonym: Rpic_2794

Alternate gene names: 187929863

Gene position: 2905586-2905005 (Counterclockwise)

Preceding gene: 187929864

Following gene: 187929861

Centisome position: 73.7

GC content: 67.87

Gene sequence:

>582_bases
ATGAAACTGATTCCTGCAGTTGCAATGCGCCGCATGCCGTGGAAGAACGGCGGCGGTGTCACGACTGAAATCGCCATCGC
GCCCGCTGGCGCGACGCTCGACAATTTCGACTGGCGCGTGAGCACCGCGCAGGTCGATGCGGCCGGGCCGTTCTCGCGTT
TTGCCGGCATTGACCGATCGCTGGCGGTGATTGCGGGCGGCCGGCTGACGATGCATCGCGCCGACGCCGAAGCTCTGACG
CTCGCGCCCGGCGAGGCACCCGCGCGCTTTCCCGGTGAAGTCGATGTGCATGCCACGCTCGATGCGCCGCTGTCGGATTT
CAACGTGATGACGCGGCGCGACGCCTGGGCGCATCATGCCGAGGCGATCGCGCTGGCAGCCGGCGAGCGCCGCTCGCTGC
CGCGCTTGCACCGGCGGGGCATGCAATGGCTGGTGTATTGCGTGCACGGCGTGTTGTCGATCGGCGCTGACGATGTCCCG
CAGGGCGCCGCGGCATGGCTCGATGCAGAGTGCGATGCTGACACGGTTGTCGCGCGTGTCGGTTCGGTCGGTTACCTGGT
GGGCTTGTGGCCGGTCGCCTGA

Upstream 100 bases:

>100_bases
TGCGCGTGGCGGATATCGCCGAGACCAACCCCGAATACGATCAGGACCGTCGCACCGTGCGCGTTGCGGCGCGTCTGGCC
TATCACCTGTTGCGCCGTCC

Downstream 100 bases:

>100_bases
CGTAGCGCCAGGTCAAACCAAATGCACCAAAAGAAAAGGGACCCCGTAGGGTCCCTTGCAAGTCTCCCGGTCCGGCATGC
ATGCCGGGCTCGGCAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKLIPAVAMRRMPWKNGGGVTTEIAIAPAGATLDNFDWRVSTAQVDAAGPFSRFAGIDRSLAVIAGGRLTMHRADAEALT
LAPGEAPARFPGEVDVHATLDAPLSDFNVMTRRDAWAHHAEAIALAAGERRSLPRLHRRGMQWLVYCVHGVLSIGADDVP
QGAAAWLDAECDADTVVARVGSVGYLVGLWPVA

Sequences:

>Translated_193_residues
MKLIPAVAMRRMPWKNGGGVTTEIAIAPAGATLDNFDWRVSTAQVDAAGPFSRFAGIDRSLAVIAGGRLTMHRADAEALT
LAPGEAPARFPGEVDVHATLDAPLSDFNVMTRRDAWAHHAEAIALAAGERRSLPRLHRRGMQWLVYCVHGVLSIGADDVP
QGAAAWLDAECDADTVVARVGSVGYLVGLWPVA
>Mature_193_residues
MKLIPAVAMRRMPWKNGGGVTTEIAIAPAGATLDNFDWRVSTAQVDAAGPFSRFAGIDRSLAVIAGGRLTMHRADAEALT
LAPGEAPARFPGEVDVHATLDAPLSDFNVMTRRDAWAHHAEAIALAAGERRSLPRLHRRGMQWLVYCVHGVLSIGADDVP
QGAAAWLDAECDADTVVARVGSVGYLVGLWPVA

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=111, Percent_Identity=38.7387387387387, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 20501; Mature: 20501

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIPAVAMRRMPWKNGGGVTTEIAIAPAGATLDNFDWRVSTAQVDAAGPFSRFAGIDRS
CCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCC
LAVIAGGRLTMHRADAEALTLAPGEAPARFPGEVDVHATLDAPLSDFNVMTRRDAWAHHA
EEEEECCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
EAIALAAGERRSLPRLHRRGMQWLVYCVHGVLSIGADDVPQGAAAWLDAECDADTVVARV
HEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCHHHHHHHH
GSVGYLVGLWPVA
CCCEEEEEEECCC
>Mature Secondary Structure
MKLIPAVAMRRMPWKNGGGVTTEIAIAPAGATLDNFDWRVSTAQVDAAGPFSRFAGIDRS
CCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCC
LAVIAGGRLTMHRADAEALTLAPGEAPARFPGEVDVHATLDAPLSDFNVMTRRDAWAHHA
EEEEECCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
EAIALAAGERRSLPRLHRRGMQWLVYCVHGVLSIGADDVPQGAAAWLDAECDADTVVARV
HEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCHHHHHHHH
GSVGYLVGLWPVA
CCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]